Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq48654 178 4e-40 >seq48654 Length=89670 Score = 178 bits (196), Expect = 4e-40 Identities = 218/298 (73%), Gaps = 0/298 (0%) Strand=Plus/Minus Query 33176 GAGGAATCAACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATA 33235 |||| | |||||||| || | | || | ||| || || || || ||||| |||| Sbjct 37624 GAGGCGTAAACAAAGTGATTCTGGTTGGGAATCTGGGTCAGGATCCCGAAGTCCGCTATA 37565 Query 33236 TGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATA 33295 ||||| ||||| ||||| |||| | | |||||||| || || ||| ||| | Sbjct 37564 TGCCTAACGGCGGTGCTGTTGCCAATATCACCCTGGCAACTTCTGAAAGCTGGCGCGACA 37505 Query 33296 AAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGC 33355 | || || || || |||||||| | || |||||||| ||||| || | ||||| || | Sbjct 37504 AGGCGACCGGCGAGCAGAAAGAGAAAACTGAATGGCACCGCGTTGTGTTGTTCGGCAAAC 37445 Query 33356 TGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAAT 33415 | ||||| || || |||||||||||||| |||||||||||||| ||| | ||||| | Sbjct 37444 TCGCAGAAGTCGCGGGCGAATACCTGCGTAAAGGCTCTCAGGTTTATATTGAAGGCGCAC 37385 Query 33416 TACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACACTACTGAAATCGT 33473 | | || || || ||||| ||||| |||||||||||||||||| || |||||||| Sbjct 37384 TGCAAACCCGTAAGTGGACCGATCAGGCCGGTGTTGAAAAATACACCACCGAAATCGT 37327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151793747997528