Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq51005 111 7e-20 seq7931 82.4 4e-11 >seq51005 Length=64323 Score = 111 bits (122), Expect = 7e-20 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 8023 GCAGCAATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTGCTTGGGAAC 8082 || ||| | || || || || || ||||||||||||||||| ||||| || | || ||| Sbjct 2287 GCTGCAGTTATCCTCCCACGCTCTGGTCTGGGCCATAAGCACGGTGTGGTATTGGGTAAC 2346 Query 8083 CTTACTGGTCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGC 8142 || ||| || || || || || |||||||| |||| ||||| ||||||| ||| Sbjct 2347 CTGGTTGGCCTCATCGACTCCGATTATCAGGGGCAACTGATGGTGTCAGTCTGGAACCGC 2406 Query 8143 TCTACAGAGC-CTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTAATCGTGCC 8201 | || | | ||||||| || | || || || || ||||| ||||||||| |||| || Sbjct 2407 GGT-CAAACCACTTTTACCATTGAGCCAGGCGAGCGCATTGCCCAGATGGTATTCGTTCC 2465 Query 8202 TGTAATGCAGCCTGAGTT 8219 ||| ||||| |||| || Sbjct 2466 TGTTGTGCAGGCTGAATT 2483 >seq7931 Length=164496 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 63031 CCTTAGCTCAGTTGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 63090 ||||||||||||||||||||||| ||||||||||| | |||||| ||||||| || Sbjct 108880 CCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAGCCCT 108939 Query 63091 GTAGGGTGTACCA 63103 |||||| |||||| Sbjct 108940 GTAGGGCGTACCA 108952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230198038887154