Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29]
139,046 sequences; 233,053,157 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq21876 96.9 2e-15
seq119770 84.2 1e-11
>seq21876
Length=2391
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||| |||| || |||||||||||||| || || || | | | || ||||
Sbjct 724 CAGGACCAAATGAAGCGTTGATTCCTTCTGAATGTTGTAATCGGACAAGGTACGGCCATC 665
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|||| |||||| ||||||||||| | || ||||| ||| | || | |||||||||||
Sbjct 664 TTCCAATTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTC 605
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || || ||| | | || | ||| | ||| || || | ||| || ||
Sbjct 604 CTGGATCTTAGCCTTAACGTTTTCGATGGTGTCAGACGGCTCAACTTCCAGGGTGATAGT 545
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || | || ||||| ||||| |||||
Sbjct 544 CTTGCCAGTCAAAGTTTTTACGAAGATTTGCAT 512
>seq119770
Length=1537
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTC 34827
|||||||||| || || | || || ||||| || ||||| ||||| | || |||| ||
Sbjct 884 ACCAGGTGAAGTGTTGAT-TCTTTTTGAATATTGTAGTCGGATAGAGTACGTCCATCTTC 942
Query 34828 CAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTT 34887
| ||| ||||||||||| || || ||||| || ||| | || | || || || || |
Sbjct 943 TAATTGTTTTCCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCCTG 1002
Query 34888 TATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTT 34947
|| || |||||| | | || | ||| | ||| || || | ||| ||||||||
Sbjct 1003 AATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCCACCTCTAAGGTGATGGTCTT 1062
Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || || || || || |||||
Sbjct 1063 GCCAGTTAGTGTTTTGACGAAAATTTGCAT 1092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325140873449474
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |