Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq48654 132 1e-26 >seq48654 Length=89670 Score = 132 bits (146), Expect = 1e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 || || ||||| || ||||| || | || |||| |||||||| ||||| ||||||||| Sbjct 37411 CCTTTACGCAGGTATTCGCCCGCGACTTCTGCGAGTTTGCCGAACAACACAACGCGGTGC 37470 Query 23599 CATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCC 23658 ||||| || || || || ||||||||||| |||||| |||| |||| || || ||| Sbjct 37471 CATTCAGTTTTCTCTTTCTGCTCGCCGGTCGCCTTGTCGCGCCAGCTTTCAGAAGTTGCC 37530 Query 23659 AGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCC 23718 ||| |||| ||| || ||| ||||||| ||| ||||| ||||| || || | |||| Sbjct 37531 AGGGTGATATTGGCAACAGCACCGCCGTTAGGCATATAGCGGACTTCGGGATCCTGACCC 37590 Query 23719 AGGCGGCCAATCAGGTCTACTTTGTT 23744 || |||| ||| |||||||| Sbjct 37591 AGATTCCCAACCAGAATCACTTTGTT 37616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139053219584552