Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq48654 125 2e-24 >seq48654 Length=89670 Score = 125 bits (138), Expect = 2e-24 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 30192 GCCCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCT 30251 ||||| ||| || || | || ||||| ||||| |||||||||||||| || ||| | Sbjct 37428 GCCCG-CGACTTCTGCGAGTTTGCCGAACAACACAACGCGGTGCCATTCAGTTTTCTCTT 37486 Query 30252 GTTGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCA 30311 |||| ||||||| |||||| |||||| || || || |||||||| |||| | Sbjct 37487 TCTGCTCGCCGGTCGCCTTGTCGCGCCAGCTTTCAGAAGTTGCCAGGGTGATATTGGCAA 37546 Query 30312 CCGCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAA 30371 | ||| |||||| ||||||||||| ||| || || ||| | || |||||||||| Sbjct 37547 CAGCACCGCCGTTAGGCATATAGCGGACTTCGGGATCCTGACCCAGATTCCCAACCAGAA 37606 Query 30372 TGACTTTGTTAACGCCTCT 30390 | |||||||| |||||||| Sbjct 37607 TCACTTTGTTTACGCCTCT 37625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145397926061024