Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq973 232 9e-56 >seq973 Length=41428 Score = 232 bits (256), Expect = 9e-56 Identities = 322/447 (72%), Gaps = 8/447 (2%) Strand=Plus/Minus Query 87433 ACCCCTCTCGGTAAATCACACTGAGCCACGTCTCCGTTAACAATCACGGTCACGTTCTCA 87492 || || | ||||| ||| ||||| | || || ||||| || ||||| ||||| || ||| Sbjct 36142 ACGCCGCGCGGTAGATCGCACTGGGTGACATCCCCGTTGACTATCACCGTCACATTTTCA 36083 Query 87493 CCCAGACGTGTCAGGAACATTTTCATCTG--TGCCTTGGTTACGTTCTGGGCTTCGTCCA 87550 || ||||| |||||||||||||||||||| || || || |||||||||||||| |||| Sbjct 36082 CCGAGACGGGTCAGGAACATTTTCATCTGACTGGCT--GTGACGTTCTGGGCTTCATCCA 36025 Query 87551 GGATAACTACCGCGTTCTCAAACGTGCGGCCACGCATATACGCGAAGGGAGCAATTTCCA 87610 | || || ||||| || || || || || ||||||||||| || || || |||||||| | Sbjct 36024 GAATCACCACCGCATTTTCGAAAGTACGCCCACGCATATAGGCAAATGGCGCAATTTCTA 35965 Query 87611 CCTTCTTCACATCCGGGCGCAAGCAGTACTGAAGGAACGTACCACCAAGGCGTTTCTCCA 87670 ||||| | ||||| |||| || ||||| | || | | || | || | | Sbjct 35964 CCTTCCCTATTTCCGGTCGCAGACAATACTGCATAAAGGAAGAGCCCAAACGACGAACGA 35905 Query 87671 GGATGTCTTGAACCGGGCGGAAATACGGGGCGAATTTCTCGCTGATGTCCCCAGGCAAGA 87730 | ||||| | ||| || | |||||| || || |||||||| || ||||||||||||| Sbjct 35904 GAATGTCGTAAACTGGCCTGAAATAAGGAGCAAATTTCTCTGAAATATCCCCAGGCAAGA 35845 Query 87731 AGCCCAGGTTCTCACCGGACTCTAAGACAGGACGCGTCACGATGATGCGCTCCACCTCTT 87790 | || || | ||| ||| || | || || || ||||| || || | || | ||||| Sbjct 35844 AACCGAGATCTTCATCGGCCTGCAGTACCGGGCGAGTCACTATAATCCTGTCTATCTCTT 35785 Query 87791 TATCCAGCAATGCTTTGGCCGCGTGCGCA--GTTGACAGGAATGTTTTACCACAACCGGC 87848 | | | || || | ||||| | |||| | ||| | || ||||| |||||||| || Sbjct 35784 TGTGAATTAACGCCTCTGCCGCTTTCGCAGCGCTGATA--AACGTTTTGCCACAACCTGC 35727 Query 87849 TTCACCCGTTGCAAAGATTAATTGCTT 87875 ||| || || ||||| || || ||||| Sbjct 35726 TTCGCCTGTGGCAAAAATCAACTGCTT 35700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 697342655889840