Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq7931 120 1e-21 >seq7931 Length=164496 Score = 120 bits (132), Expect = 1e-21 Identities = 234/346 (68%), Gaps = 0/346 (0%) Strand=Plus/Plus Query 188846 CTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACG 188905 |||| ||||||| || | | || ||||| |||||||| || ||||| || |||||| Sbjct 28952 CTATGGCTGATGCCACCACGCTGACCGAAGCCGGTTATGTGGGGGAAGACGTTGAAAACA 29011 Query 188906 TATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTG 188965 | | | | | ||| | |||||||||| | | ||| | || || |||| Sbjct 29012 TCATCCAGAAGCTGCTGCAAAAATGTGATTACGATGTACAGAAAGCACAGCGCGGCATTG 29071 Query 188966 TATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAG 189025 | || ||||||||| | || || ||| || | || ||||| | | | ||||| ||||| | Sbjct 29072 TCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATCACCCGTG 29131 Query 189026 ATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGA 189085 | || || || || || || ||||| || | || || | ||||||||||| || || Sbjct 29132 ACGTTTCAGGTGAGGGCGTGCAGCAGGCGCTGTTGAAGCTGATTGAAGGTACCGTGGCCG 29191 Query 189086 AAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAA 189145 ||||||||||| || || ||||| || || || || || | || | | ||||| Sbjct 29192 CTGTTCCTCCTCAGGGCGGACGTAAGCATCCACAGCAGGAGTTCCTGCAGGTTGATACCT 29251 Query 189146 CTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAA 189191 | || || ||||||| || || || |||| ||||| || || Sbjct 29252 CCAAGATTCTGTTTATCTGCGGCGGCGCCTTTGCCGGTCTCGATAA 29297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1589074368839808