Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_024139.1 Length=108483 Score E Sequences producing significant alignments: (Bits) Value seq14905 111 1e-19 >seq14905 Length=119551 Score = 111 bits (122), Expect = 1e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 27350 CTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCATTAAATCG 27409 |||||| || |||||| | || ||||| | ||| ||||| | |||| | ||||| || Sbjct 42450 CTGAGTGAAAGTACGAGTGATCACGTCCTGCTGCTGTTCCGGCGTCAACGAGTTAAAACG 42391 Query 27410 AACAGCGTAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGC 27469 || ||||| || ||||||||||| |||||||||||||| || ||||||||||| ||| Sbjct 42390 CACGGCGTACCCCGAGACACGGATAGTCAACTGAGGATACTTCTCAGGATGTTTTATCGC 42331 Query 27470 ATCCAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCACCTTC 27523 ||| ||| ||||| | | || || || || || ||||| || ||||| Sbjct 42330 ATCTTCGAGCGTCTCACGACGCATGACGTTAACGTTAAGATGCTGCCCCCCTTC 42277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346432730527464