Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29]
139,046 sequences; 233,053,157 total letters
Query= NC_024329.1
Length=39425
Score E
Sequences producing significant alignments: (Bits) Value
seq86164 105 2e-18
seq139035 80.6 7e-11
>seq86164
Length=15879
Score = 105 bits (116), Expect = 2e-18
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 20491 GAAGATGCTTTTATTGACTTATCTTTTGAAATGGGTGGAGTAGAAGGACTAACAGCAGAG 20550
|||||||| ||||||| | |||||||| | || || | ||||| ||||| || ||
Sbjct 14789 GAAGATGCGTTTATTGCTCTTGCTTTTGAAGTAGGAGGGATTGAAGGGCTAACGGCTGAT 14848
Query 20551 GATATGAAACTTTATATTCGTTATATTTGTGATAGACGCTTATTGCAGTTAGGACTAAAA 20610
|| | | | | |||||| | ||||| || ||||| || || ||| |||| ||||||
Sbjct 14849 GAGGTAAGATTATATATTAGATATATCGCAGACAGACGTTTGTTTCAGCTAGGGCTAAAA 14908
Query 20611 ACAAACTATGGTGTTAAGGATAACCCCTTACCTTGGATTGATGAGTTATTAGGTAGTGTT 20670
| ||| || || ||||||| | || ||| ||||||| | || | |||||
Sbjct 14909 GATATTTATATGGTAAAAAATAACCCTCTGCCATGGCTTGATGAAATGCTAAATGGTGTT 14968
Query 20671 GTTCATACTAACTTCTTTGAAGCTCGTTCTACTGAATATTCAAAAG 20716
| ||||| |||||||||||| | | | || |||||||||||||
Sbjct 14969 GAGCATACAAACTTCTTTGAAAATAGGGCAACCGAATATTCAAAAG 15014
>seq139035
Length=9387
Score = 80.6 bits (88), Expect = 7e-11
Identities = 143/207 (69%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 14746 CAACTGGTGGTGATGCTAATAGAAAAGCATTAAATATTCATAATGCTGT--TGTTATTAA 14803
||||||||||||| | ||| | |||||||||||||| ||| ||||||| | || |
Sbjct 6951 CAACTGGTGGTGACCCAAATCGCAAAGCATTAAATATACATCATGCTGTAATAGTAACAG 6892
Query 14804 TCAAGCCTTTTTAAATGCAGTTAGATATGATGAAAGCTGGTATTTAATTAACCCAGATAG 14863
||| ||| | | || ||| | ||||| || ||| ||||||| | ||| |||
Sbjct 6891 ATAAG--TTTATGCAAGCTGTTGAAGATGATCAAGAATGGAATTTAATAAGCCCTCATAA 6834
Query 14864 TAATGATGTGGTAGATAAAGTAATTGCTCGTGATTTATATAAACAAATCTTAACAACAAG 14923
||| | || | | ||||| || || ||| ||| | |||| |||||| ||||
Sbjct 6833 CAATAAAGTTATTTCAACAGTAAAAGCACGGGATATATGGATTAAAATATTAACAGCAAG 6774
Query 14924 ACACCAAACTGGTGAGCCTTATATTAT 14950
| ||||||| || |||||||||||
Sbjct 6773 AATTGAAACTGGAGAACCTTATATTAT 6747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125830289017524
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |