Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq48654 183 8e-42 >seq48654 Length=89670 Score = 183 bits (202), Expect = 8e-42 Identities = 188/246 (76%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||| |||||||| |||||||| ||||| | |||| | || ||||| ||||| || Sbjct 37634 ATGGCCAGCAGAGGCGTAAACAAAGTGATTCTGGTTGGGAATCTGGGTCAGGATCCCGAA 37575 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || |||||| | || | |||||| || || || || ||||| | ||||| ||||| Sbjct 37574 GTCCGCTATATGCCTAACGGCGGTGCTGTTGCCAATATCACCCTGGCAACTTCTGAAAGC 37515 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| || ||| ||||| ||| ||||||||||| || |||||||| ||| ||| Sbjct 37514 TGGCGCGACAAGGCGACCGGCGAGCAGAAAGAGAAAACTGAATGGCACCGCGTTGTGTTG 37455 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 || || || || || ||||| || ||||||||||| || ||||| ||||| ||||||||| Sbjct 37454 TTCGGCAAACTCGCAGAAGTCGCGGGCGAATACCTGCGTAAAGGCTCTCAGGTTTATATT 37395 Query 38434 GAAGGC 38439 |||||| Sbjct 37394 GAAGGC 37389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132679760661812