Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_024791.1 Length=50440 Score E Sequences producing significant alignments: (Bits) Value seq38357 86.0 2e-12 >seq38357 Length=36386 Score = 86.0 bits (94), Expect = 2e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 48201 GATGCCTGTCAGGGATTGGAATATGAGGTAAATACTCTTCACACTTCCAACGGACAAACT 48260 || |||| |||| ||||||||||||| ||||| |||||||| ||||||| || || Sbjct 27582 GACGCCTTTCAGTCGCTGGAATATGAGGTTAATACGCTTCACACCGCCAACGGCCAGACG 27641 Query 48261 CCATTCGTTACGTTAGGATTCGGTCTAGGTACATCTTGGCAAGCTAAGCTAGTTCAA 48317 || || || || || || || ||||| ||||| | ||||||||| ||| ||||| Sbjct 27642 CCGTTTGTGACCTTTGGCTTTGGTCTGGGTACCTGTTGGCAAGCGCGGCTGATTCAA 27698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161020088533304