Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq48654 154 4e-33 >seq48654 Length=89670 Score = 154 bits (170), Expect = 4e-33 Identities = 267/379 (70%), Gaps = 17/379 (4%) Strand=Plus/Plus Query 124 TGGCTGCTGCGGCTTACCCCATCCGCCTTGCTGGCCGCCCTG--GCTTTGCCCACCGGC- 180 ||||||||| || | |||||||||||| ||||||||||| || || | | || ||| | Sbjct 37209 TGGCTGCTGAGGTTGACCCCATCCGCCCTGCTGGCCGCC-TGAAGCCT-GACCGCCGCCT 37266 Query 181 -CTGGTT-ATCGTTGGCCGCT-GAC-----AGCATCAACAACCGGCCATTCATGCCCACC 232 |||| | || | | || ||| |||||| || |||| | | ||| Sbjct 37267 GCTGGAGCACCGCCGCCAGCACGACCACCCAGCATCTGCATGGTGCCACCAACGTTTACC 37326 Query 233 ACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGCAGC 292 |||||||| || ||||| ||||| || ||||| || |||||| || |||||||| Sbjct 37327 ACGATTTCGGTGGTGTATTTTTCAACACCGGCCTGATCGGTCCACTTACGGGTTTGCAGT 37386 Query 293 GCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAGC 352 ||||||||||| | |||| |||||| |||||||| | || |||| |||||| || Sbjct 37387 GCGCCTTCAATATAAACCTGAGAGCCTTTACGCAGGTATTCGCCCGCGACTTCTGCGAGT 37446 Query 353 TTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGCTTA 412 || ||||| | || |||||||||||||| ||||| ||||||| ||| || ||| ||| Sbjct 37447 TTGCCGAACAACACAACGCGGTGCCATTCAGTTTTCTCTTTCTGCTCGCCGGTCGCCTTG 37506 Query 413 TCCTTCCAGGTTTCAGACGTGGCAA--TTGATAACTGCGCCACGCCGTTGCCGTTCGGCA 470 || |||| ||||||| || || | ||||| | || || | |||||| |||| Sbjct 37507 TCGCGCCAGCTTTCAGAAGTTGCCAGGGTGATA--TTGGCAACAGCACCGCCGTTAGGCA 37564 Query 471 GCGTGCGGAATTCTGGATC 489 ||||| ||| ||||| Sbjct 37565 TATAGCGGACTTCGGGATC 37583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135178028770876