Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq2788 203 3e-47 >seq2788 Length=136445 Score = 203 bits (224), Expect = 3e-47 Identities = 354/510 (69%), Gaps = 4/510 (1%) Strand=Plus/Plus Query 26773 GAACTTGTCAACGTCGGCGAAGTAAGCCTCGTACATGTCAGGATTGTCTTTCGGGTCGAA 26832 ||||| ||| ||||||||| | || ||||||| | |||| ||| |||| ||| Sbjct 19168 GAACTCGTCCTGATCGGCGAAGAACGCGTCGTACAGGCCAGGCACGTCAGACGGGCTGAA 19227 Query 26833 CAGATACA-GAGGCTGCTTGGCAACCAGGCGCTCAAACATCACGCGGTTGATCTGAATAC 26891 |||| | | || || | |||||| |||| | |||||| ||||||||| | | Sbjct 19228 CAGAGTGATGTCGCCGCCTTT-AACCAGACGCTGATACATCAGTTTGTTGATCTGCACGC 19286 Query 26892 CGTAGTCGATGCGACGTTCGCGGTTCTCTTCTGTTCCACGGTTGTTCTTCAGGACAACGA 26951 ||||||| ||| |||| ||||||| |||| ||||||||||| ||||| || | | Sbjct 19287 CGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAGAACCAGCA 19346 Query 26952 CGTCATCGAACTGGTAG-TGCCACAGAGGGATGTACCCTGTCGCTGCACCGCCGCGAATG 27010 | || |||| || ||||||| ||| | || ||||| ||||||||||| | | Sbjct 19347 GGCTTTC-AACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCCGCGCACG 19405 Query 27011 CCGCCCTGAGAGCACGACTTGAGCGCCCCAGTGAGATACTTGATGAACGGGATCAGGCCT 27070 |||||||||||||| || || | |||| || | ||| ||||||||| ||| Sbjct 19406 CCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAACGGGATACAGCCG 19465 Query 27071 GTATGAACCATCTCTCCGCCGCGAATAGGACTACCAATACCACGGATTGCCCCGAAGTCA 27130 ||||| | || ||||||||||| || ||||| | ||||||| || || Sbjct 19466 GTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAGCGCACGGATGCGGCCAGCGTTG 19525 Query 27131 AAACCGATACCAGCGCGTTTGGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATA 27190 | |||||||| ||||| | || || || | ||||||| ||| || |||||||| Sbjct 19526 ATGCCGATACCTGCGCGCTGTGAAACGTATTTCACGATGGCGCTGGAGGTCGCGTTGATG 19585 Query 27191 GAGTCCAGGGTGTCACCAGTCTTGATCAACACACATGAGCTGAACTGACGGGTAGGAGTA 27250 ||||||||| |||| || || ||||| || || ||||||||||| || || || || Sbjct 19586 GAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGAGCTGAACTGGCGAGTCGGGGTG 19645 Query 27251 CGAACACCGGCCATGATCGGGGTTGGAAGA 27280 || || |||| ||| || || || || ||| Sbjct 19646 CGCACGCCGGACATAATTGGCGTAGGCAGA 19675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496115412876960