Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq14905 149 5e-31 seq6040 120 2e-22 seq2551 95.1 9e-15 >seq14905 Length=119551 Score = 149 bits (164), Expect = 5e-31 Identities = 139/177 (79%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 109109 GGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGCAT 109168 || || ||||| ||||||||||| ||||||| || || || |||||||| | || ||| Sbjct 42283 GGGCAGCATCTTAACGTTAACGTCATGCGTCGTGAGACGCTCGAAGATGCGATAAAACAT 42342 Query 109169 CCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCT 109228 || || || ||||| ||| |||| |||||||| || || || || || || |||||||| Sbjct 42343 CCTGAGAAGTATCCTCAGTTGACTATCCGTGTCTCGGGGTACGCCGTGCGTTTTAACTCG 42402 Query 109229 CTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAA 109285 |||| ||||||||||||| ||||| ||| ||||||| || ||| |||| || ||| Sbjct 42403 TTGACGCCGGAACAGCAGCAGGACGTGATCACTCGTACTTTCACTCAGAGCCTGTAA 42459 >seq6040 Length=129903 Score = 120 bits (132), Expect = 2e-22 Identities = 76/81 (94%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 9581 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTA 9640 |||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||| Sbjct 118355 ATTTGGTGGCCCCTACTGGACTTGAACCAGTGACCAAGCGATTATGAGTCGCGTGCTCTA 118296 Query 9641 ACC-ACTGAGCTAAGGGGCCG 9660 ||| ||||||||||||||||| Sbjct 118295 ACCAACTGAGCTAAGGGGCCG 118275 >seq2551 Length=53185 Score = 95.1 bits (104), Expect = 9e-15 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 109109 GGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGCAT 109168 ||||| ||||||||||||||||| || || || | ||| || || | | || Sbjct 36940 GGTCAGCATCTGAACGTTAACGTAATGAACCGCGAGATGCTGCTGGAGGCCATGGAAAAT 36999 Query 109169 CCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCT 109228 || || |||| || |||||||| ||||| || || || ||||| || ||||| ||||| Sbjct 37000 CCTGAGAAATTCCCTCAGCTGACTATCCGCGTTTCAGGCTATGCGGTACGCTTCAACTCA 37059 Query 109229 CTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACT 109273 || || |||||||||| ||||| || | |||||||||||| Sbjct 37060 CTAACCAAAGAACAGCAGCAGGACGTGATTACCCGTACCTTTACT 37104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386221189628194