Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq2788 183 3e-41 >seq2788 Length=136445 Score = 183 bits (202), Expect = 3e-41 Identities = 287/406 (71%), Gaps = 6/406 (1%) Strand=Plus/Plus Query 58355 GTTGATCTGAACACCGTAGTCAGTACGGCGCTCGCGGTTGTTCTCAATACCACGGTTGTT 58414 ||||||||| || |||||||| | | || |||||||| |||| |||||||||||| Sbjct 19273 GTTGATCTGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTT 19332 Query 58415 CTTCAGCACGATCATGTCATCGAACTGGAAGTGCCACATCGGGTAATACATGGTTGCTGA 58474 ||||| || | || | || | | | ||||||||||||||| ||| ||| || | Sbjct 19333 TTTCAGAACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGC 19392 Query 58475 GCCGCCACGGATACCACCCTGAGAACAGCTCTTCAGATCACCAAC--GAACTTCTTGATG 58532 ||||| || | || |||||||| ||| || | | || | ||| | ||| | Sbjct 19393 ACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTAAC--CGCCGTCTGGAAGTGCTTATAG 19450 Query 58533 AACGGGATCGTACCGGTATG-AGTCATCTCACCGTCGCGGATAGAGGAACCCAGGGCACG 58591 |||||||| |||||||| | | | |||||| |||| || | | |||||| ||||| Sbjct 19451 AACGGGATACAGCCGGTATGGAATGCT-TCACCGCCGCGAATCGGGCTACCCAGCGCACG 19509 Query 58592 GATAGCGCCGAAGTCAACACCGATACCAGCACGCTTAGACACGTATTTCACGATTGCGGT 58651 ||| ||| || | |||||||| || |||| || |||||||||||||| ||| | Sbjct 19510 GATGCGGCCAGCGTTGATGCCGATACCTGCGCGCTGTGAAACGTATTTCACGATGGCGCT 19569 Query 58652 GCCAGTAGCAGTAATGCTGTCCAGGGTGTCACCAGACTTGATCAGGACACATGAGCTGAA 58711 | || || | ||| ||||||| |||| || ||| |||||| || || |||||||| Sbjct 19570 GGAGGTCGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGAGCTGAA 19629 Query 58712 CTGACGGGTACGGGTACGCACGCCTGCCATGATAGGTGTTGGGAGA 58757 ||| || || |||| |||||||| | ||| || || || || ||| Sbjct 19630 CTGGCGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGA 19675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517882314499200