Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq104767 154 4e-33 >seq104767 Length=4578 Score = 154 bits (170), Expect = 4e-33 Identities = 134/160 (84%), Gaps = 6/160 (4%) Strand=Plus/Minus Query 37390 GCAGTAAACCGCGCATCGCAGCGCGTAACAATCCCGAGTCTTTCAGAAAGCTGAGCCTGA 37449 ||||||| |||||| ||||||||| | || || ||||||||||||||||||||||||| Sbjct 4575 GCAGTAACCCGCGCGTCGCAGCGCATTTCA-TCGAGAGTCTTTCAGAAAGCTGAGCCTGA 4517 Query 37450 GAATTGCCGTATAT-GGTGGCGACCATCTCGGGGACGGCTTTTCTGTGCGAACAGGCTCA 37508 ||| ||||| ||| |||||||||| |||| || |||||||||||||||| |||||||| Sbjct 4516 GAACAGCCGT-TATAGGTGGCGACC-TCTCTCGGGCGGCTTTTCTGTGCGACCAGGCTCA 4459 Query 37509 TCTTTCTAAAAGGTAAAGACGCAATGAACTACCCAACCGT 37548 |||||||||||||| |||| |||| || ||||| || Sbjct 4458 CTTTTCTAAAAGGTAA--ACGCTATGACATATCCAACAGT 4421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123648297817408