Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq31628 82.4 8e-11 >seq31628 Length=8758 Score = 82.4 bits (90), Expect = 8e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||| ||||||| || ||| ||| || ||||| | ||| ||||||||||| Sbjct 5465 GTGAAAATATAACGAGCACTCGCACAATCTTTTCCACCTTGTAAACGTGTACCGAATTGA 5524 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 |||| || || || | || | ||||| | || ||| ||||||| ||||| || ||| Sbjct 5525 CCACGTGGTTCTAATAAATTTATATTGTTTGAACCGACATAGTTTTGTGCCAAATTAACA 5584 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGC 117462 || ||| |||| || |||||||| ||||| || Sbjct 5585 ATGGTAGCTTGTAGTGAAATTTCACCATGATGATAGGC 5622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546264897550800