Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq17393 154 6e-33 seq48654 147 8e-31 >seq17393 Length=1625 Score = 154 bits (170), Expect = 6e-33 Identities = 192/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 24441 GTCAGGCGGCGGACGCGCACCTGCCAGCCATTGGTGGCCGCCGGCAGGTCGATCCGGCGG 24500 || ||||| || ||||| |||||||||||| | || || || | |||||| || || Sbjct 1604 GTAAGGCGACGCACGCGGACCTGCCAGCCAATATGCGCAGCGGGTAAGTCGATGCGATGG 1545 Query 24501 GAACGCTCGTAGCGGGTGGTGGTCTTGCCATCGACGGCCTCGCGCAGCACCTCCTGATAG 24560 | || || || ||||| || || || || ||| ||||| ||||||||| Sbjct 1544 CTTCTTTCATACTTTGTCGTGGTTTTACCGTCTACCGCCGTATTGAGCACTTCCTGATAG 1485 Query 24561 GCGCCGCCGTCGGTGGCCAGATCTACGGCATATTCGATCCGGTACCCGCCGATGTTGCCG 24620 || |||||||| ||||||| ||| || || |||| |||||||||||| | | || ||| Sbjct 1484 GCACCGCCGTCTGTGGCCAAATCAACAGCGTATTGGATCCGGTACCCCACCACGTCGCCA 1425 Query 24621 TTGGTGTCCTGCTGCTGGAGCGCTGGCCAGGCGAAGCGCAGGCGCACTGCGGAAAGCTGG 24680 ||| | ||| | || ||||| | ||||| ||||||||| |||||||| |||||||| Sbjct 1424 TTGTCTTTTTGCAGTTGAAGCGCCGCCCAGGAGAAGCGCAGACGCACTGCCGAAAGCTGT 1365 Query 24681 GTATTGCTCAGCGAGCGCACCCA 24703 |||||| | | ||||| ||||| Sbjct 1364 GTATTGGTGATGGAGCGTACCCA 1342 >seq48654 Length=89670 Score = 147 bits (162), Expect = 8e-31 Identities = 214/302 (71%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 7276 AGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTAC 7335 ||||| || |||||||| ||||||||||| || | ||| || || ||| |||||| Sbjct 37625 AGAGGCGTAAACAAAGTGATTCTGGTTGGGAATCTGGGTCAGGATCCCGAAGTCCGCTAT 37566 Query 7336 ATGCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGAC 7395 ||||| |||||| ||| || |||| |||||||| || || || |||||| ||| Sbjct 37565 ATGCCTAACGGCGGTGCTGTTGCCAATATCACCCTGGCAACTTCTGAAAGCTGGCGCGAC 37506 Query 7396 AAGCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGC 7455 ||| ||||||| |||| | || | || | |||||||| ||||| ||||| Sbjct 37505 AAGGCGACCGGCGAGCAGAAAGAGAAAACTGAATGGCACCGCGTTGTGTTGTTCGGCAAA 37446 Query 7456 CTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGC 7515 || || || |||| ||||| |||||||| || || || ||||| || | |||||| Sbjct 37445 CTCGCAGAAGTCGCGGGCGAATACCTGCGTAAAGGCTCTCAGGTTTATATTGAAGGCGCA 37386 Query 7516 CTGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATC 7575 |||| ||||| |||||| | ||||| ||| || |||||||||||| |||| Sbjct 37385 CTGCAAACCCGTAAGTGGACCGATCAGGCCGGTGTTGAAAAATACACCACCGA---AATC 37329 Query 7576 GT 7577 || Sbjct 37328 GT 37327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194497520138012