Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq2788 116 4e-21 >seq2788 Length=136445 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 147730 GGGCTGAATAATGTGATGTAGTCATTCTTAATAAGACGTTCTAACATCAGGTCATTAATC 147789 |||||||| | ||||||| | | |||| ||||| | ||||||| | || ||| Sbjct 19220 GGGCTGAACAGAGTGATGTCGCCGCCTTTAACCAGACGCTGATACATCAGTTTGTTGATC 19279 Query 147790 TGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACACCTTTATTGTTTTTCAGA 147849 || ||||| || || | |||||||| ||||| | || ||||| |||||||||||| Sbjct 19280 TGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAGA 19339 Query 147850 ACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACAATGTTGCTGCACCACCA 147909 || || ||| |||| ||||| | ||||| || || ||| ||| || || ||||| || Sbjct 19340 ACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCCG 19399 Query 147910 CGTACACCACCTTGGGAACATGATTTAAC 147938 || || || || || || || |||||||| Sbjct 19400 CGCACGCCGCCCTGAGAGCAGGATTTAAC 19428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567341800530480