Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq40252 87.8 5e-13 >seq40252 Length=19659 Score = 87.8 bits (96), Expect = 5e-13 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 17927 TCATTATGGCACCTGTGTTGT-TCTGAGGTGAGCATATCACCTCTGTTCAGGTGGCCAAA 17985 |||| ||| ||||||| |||| | |||||||| | |||||||||||||||||||||||| Sbjct 15181 TCATAATGTCACCTGTTTTGTCTATGAGGTGATGACATCACCTCTGTTCAGGTGGCCAAA 15240 Query 17986 TTCAGTAAACCACTTCAATT 18005 |||| || ||||| ||||| Sbjct 15241 TTCACTATGCCACTACAATT 15260 Score = 82.4 bits (90), Expect = 2e-11 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 40552 TCATTATGGCACCTGTGTTGT-TCTGAGGTGAGCATATCACCTCTGTTCAGGTGGCCAAA 40610 |||| ||| ||||||| |||| | |||||||| | |||||||||||||||||||||||| Sbjct 15181 TCATAATGTCACCTGTTTTGTCTATGAGGTGATGACATCACCTCTGTTCAGGTGGCCAAA 15240 Query 40611 TTCAGTAAACCACTTCACTCATCAT 40635 |||| || ||||| || | || || Sbjct 15241 TTCACTATGCCACTACAATTATTAT 15265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131941781207600