Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028847.1 Length=170527 Score E Sequences producing significant alignments: (Bits) Value seq2788 149 7e-31 >seq2788 Length=136445 Score = 149 bits (164), Expect = 7e-31 Identities = 301/447 (67%), Gaps = 0/447 (0%) Strand=Plus/Plus Query 143911 CATAAGGTCGTTCATCTGGATTCCGTAGTCCATATGGCGAATACGGTTCTCATCGACACC 143970 ||| || | ||| ||||| | ||||||||||| || |||| ||||| | || ||||| Sbjct 19264 CATCAGTTTGTTGATCTGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACC 19323 Query 143971 TTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 144030 ||||||||||||||| ||||| |||||||||||| ||||| || || || | Sbjct 19324 ACGGTTGTTTTTCAGAACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAG 19383 Query 144031 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 144090 || ||||| ||||| || | || || || || || |||||||| || |||||||| || Sbjct 19384 GGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTG 19443 Query 144091 TTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTC 144150 || |||| || ||| |||||||| |||| || || ||| | ||| Sbjct 19444 CTTATAGAACGGGATACAGCCGGTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAG 19503 Query 144151 AGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTAT 144210 ||||| || ||| ||||||| || ||||| || || | |||| ||||| | || Sbjct 19504 CGCACGGATGCGGCCAGCGTTGATGCCGATACCTGCGCGCTGTGAAACGTATTTCACGAT 19563 Query 144211 TGAGTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGA 144270 | | | | || ||| || || | ||| |||||| || || | || ||||| Sbjct 19564 GGCGCTGGAGGTCGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGA 19623 Query 144271 ACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAACCTG 144330 || || || || || || || || | || | |||||| || || || | |||| || Sbjct 19624 GCTGAACTGGCGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTT 19683 Query 144331 ACGGGTACTTACAGCATCATAAAAACG 144357 ||| || |||||||| ||||| Sbjct 19684 GAAGGTTGAAACCGCATCATAGAAACG 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544610178583920