Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29]
139,046 sequences; 233,053,157 total letters
Query= NC_028881.1
Length=170473
Score E
Sequences producing significant alignments: (Bits) Value
seq2788 179 4e-40
>seq2788
Length=136445
Score = 179 bits (198), Expect = 4e-40
Identities = 310/448 (69%), Gaps = 2/448 (0%)
Strand=Plus/Plus
Query 142849 CATAAGGTCGTTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCAACGCC 142908
||| || | ||| | ||| | ||||||||||| ||||||| ||||| | ||||| ||
Sbjct 19264 CATCAGTTTGTTGATCTGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACC 19323
Query 142909 TTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 142968
||||||||||||||| ||||| |||||||||||| ||||| || || || |
Sbjct 19324 ACGGTTGTTTTTCAGAACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAG 19383
Query 142969 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATG 143028
|| ||||| ||||| || | || || || || || |||||||| || |||||||| ||
Sbjct 19384 GGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTG 19443
Query 143029 CTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATACCAATACGAGAACCTTC 143088
||| |||| || ||| |||||||| ||||||| | ||| | |||
Sbjct 19444 CTTATAGAACGGGATACAGCCGGTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAG 19503
Query 143089 AGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATATACTCGATTAT 143148
||||| || ||| ||||||| || |||||||| || | |||| || | | ||
Sbjct 19504 CGCACGGATGCGGCCAGCGTTGATGCCGATACCTGCGCGCTGTGAAACGTATTTCACGAT 19563
Query 143149 TGAGTTAGCAGTTTTATTAATTGATTTCAGCGAGTCACCTGCTTCAATAACAACGCAAGA 143208
| | | | || || || || | ||| ||| || || || | ||||||||
Sbjct 19564 GGCGCTGGAGGTCGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGA 19623
Query 143209 ACTAAACTGACGGGTCGGGGTACGAGCACCAGCCATAATAGGAGTAGGCAATGAAATC-T 143267
|| ||||| || |||||||| || | || | |||||| || ||||||| |||||| |
Sbjct 19624 GCTGAACTGGCGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTT 19683
Query 143268 GACGGGTGCTAACAGCATCATAAAAACG 143295
|| || || ||| |||||||| |||||
Sbjct 19684 GAAGGTTG-AAACCGCATCATAGAAACG 19710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544437678923280
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |