Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq2788 150 2e-31 >seq2788 Length=136445 Score = 150 bits (166), Expect = 2e-31 Identities = 335/497 (67%), Gaps = 12/497 (2%) Strand=Plus/Plus Query 140715 GGACTAAACAGAGTGATGTAATCATTCTTGGCCAGTCGTTCCATCATCAGGTTATTCAAC 140774 || || ||||||||||||| | || |||| || | |||||| || || | | Sbjct 19220 GGGCTGAACAGAGTGATGTCGCCGCCTTTAACCAGACGCTGATACATCAGTTTGTTGATC 19279 Query 140775 TGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCCTTTGTTGTTCTTCAGA 140834 || || || |||||||| || | | ||||| ||||||| || |||||| |||||| Sbjct 19280 TGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAGA 19339 Query 140835 ACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 140894 || || | |||||||||||| ||||| || || || | || ||||| ||||| Sbjct 19340 ACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCCG 19399 Query 140895 CGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAATA 140954 || | || || || || || |||||||| ||||| ||||| || || ||||||| ||| Sbjct 19400 CGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAACGGGATA 19459 Query 140955 ACACCAGTATGCTTGACTTCACCCATACCGATTTTCG---AACCTTCAGCACGAATCATG 141011 || ||||| ||||||| ||| ||| ||| ||||| || | Sbjct 19460 CAGCCGGTATGGAATGCTTCACC---GCCGCGAATCGGGCTACCCAGCGCACGGATGCGG 19516 Query 141012 CCAACGTTGATACCGATACCTGCACGCTTACTGATA--TATTCGATGATTGAATTAGCAG 141069 ||| ||||||| ||||||||||| |||| ||| | |||| | ||| | | | | Sbjct 19517 CCAGCGTTGATGCCGATACCTGCGCGCT--GTGAAACGTATTTCACGATGGCGCTGGAGG 19574 Query 141070 TCTTATTGATTGACTTCAGGGAGTCAGCCGC-TTCGATAACCACGCAGGAACTGAACTGT 141128 || ||||| || | |||| ||| ||||| ||||| | ||||| || |||||||| Sbjct 19575 TCGCGTTGATGGAGTCCAGGCTGTC-GCCGCACTCGATCAGTACGCAAGAGCTGAACTGG 19633 Query 141129 CTTGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAACCTGTCGTGTAGAT 141188 | || || || | |||| | ||| || || || |||| |||| || || || Sbjct 19634 CGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTTGAAGGTTGAA 19693 Query 141189 ACTGCATCATAAAAACG 141205 || |||||||| ||||| Sbjct 19694 ACCGCATCATAGAAACG 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544000040895360