Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq2788 150 2e-31 >seq2788 Length=136445 Score = 150 bits (166), Expect = 2e-31 Identities = 335/497 (67%), Gaps = 12/497 (2%) Strand=Plus/Plus Query 143043 GGACTAAACAGAGTGATGTAATCATTCTTAGCCAGTCGTTCCATCATCAGGTTATTAAGC 143102 || || ||||||||||||| | ||| |||| || | |||||| || || | | Sbjct 19220 GGGCTGAACAGAGTGATGTCGCCGCCTTTAACCAGACGCTGATACATCAGTTTGTTGATC 19279 Query 143103 TGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCCCTTGTTGTTCTTCAGA 143162 || || || |||||||| || | | ||||| ||||||| || |||||| |||||| Sbjct 19280 TGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAGA 19339 Query 143163 ACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCAGCGCCGCCA 143222 || || | |||||||||||| ||||| | || || | || ||||| ||||| Sbjct 19340 ACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCCG 19399 Query 143223 CGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAATA 143282 || | || || || || ||||||||||| ||||| ||||| || || ||||||| ||| Sbjct 19400 CGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAACGGGATA 19459 Query 143283 ACACCAGTATGGCGAACTTCACCCATACCGATTTTCG---AACCTTCAGCACGAATCATA 143339 || |||||| ||||||| ||| ||| ||| ||||| || Sbjct 19460 CAGCCGGTATGGAATGCTTCACC---GCCGCGAATCGGGCTACCCAGCGCACGGATGCGG 19516 Query 143340 CCAACGTTGATGCCGATACCCGCACGCTTACTGATA--TATTCGATGATTGAATTGGCCG 143397 ||| |||||||||||||||| || |||| ||| | |||| | ||| | ||| | Sbjct 19517 CCAGCGTTGATGCCGATACCTGCGCGCT--GTGAAACGTATTTCACGATGGCGCTGGAGG 19574 Query 143398 TCTTATTAATTGACTTCAGGGAGTCAGCAGC-TTCGATAACCACACAGGAACTGAACTGC 143456 || || || || | |||| ||| || || ||||| | || || || |||||||| Sbjct 19575 TCGCGTTGATGGAGTCCAGGCTGTC-GCCGCACTCGATCAGTACGCAAGAGCTGAACTGG 19633 Query 143457 CTGGTAGGTGTTCTGGCGCCCGCCATGATGGGCGTGGGCAACGAAACCTGTCTTGTGGAT 143516 | || || || | |||| | ||| || ||||| |||| |||| || || || Sbjct 19634 CGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTTGAAGGTTGAA 19693 Query 143517 ACTGCATCATAAAAACG 143533 || |||||||| ||||| Sbjct 19694 ACCGCATCATAGAAACG 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545552537841120