Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028957.1 Length=171541 Score E Sequences producing significant alignments: (Bits) Value seq2788 170 2e-37 >seq2788 Length=136445 Score = 170 bits (188), Expect = 2e-37 Identities = 342/499 (69%), Gaps = 16/499 (3%) Strand=Plus/Plus Query 142788 GGACTAAACAGAGTGATGTAATCATTCTTAGCCAGACGTTCCATCATCAAGTTATTCAAC 142847 || || ||||||||||||| | ||| ||||||| | ||||| || || | | Sbjct 19220 GGGCTGAACAGAGTGATGTCGCCGCCTTTAACCAGACGCTGATACATCAGTTTGTTGATC 19279 Query 142848 TGGACGCCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAGA 142907 || ||||| |||||||| || | | |||||| ||||||| || |||||| |||||| Sbjct 19280 TGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAGA 19339 Query 142908 ACGAGCAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCAGCGCCGCCC 142967 || |||| |||||||||||| ||||| | || || | || ||||| ||||| Sbjct 19340 ACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCCG 19399 Query 142968 CGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAATA 143027 || | || || || || ||||||||||| ||||| ||||| || || ||||||| ||| Sbjct 19400 CGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAACGGGATA 19459 Query 143028 ACACCAGTATGACGAA--CTTCACCCATACCGATTTTCG---AACCTTCAGCACGAATCA 143082 || ||||| ||| ||||||| ||| ||| ||| ||||| || Sbjct 19460 CAGCCGGTATG--GAATGCTTCACC---GCCGCGAATCGGGCTACCCAGCGCACGGATGC 19514 Query 143083 TACCAACGTTGATGCCGATACCCGCACGCTTACTGATA--TATTCGATGATTGAATTGGC 143140 ||| |||||||||||||||| || |||| ||| | |||| | ||| | ||| Sbjct 19515 GGCCAGCGTTGATGCCGATACCTGCGCGCT--GTGAAACGTATTTCACGATGGCGCTGGA 19572 Query 143141 AGTCTTATTGATTGACTTCAGGGAGTCTGCAGC-TTCGATAACCACGCAGGAACTGAACT 143199 ||| ||||| || | |||| ||| || || ||||| | ||||| || ||||||| Sbjct 19573 GGTCGCGTTGATGGAGTCCAGGCTGTC-GCCGCACTCGATCAGTACGCAAGAGCTGAACT 19631 Query 143200 GCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAACCTGTCTTGTGG 143259 | || || || || | |||| | ||| || || || |||| |||| || || | Sbjct 19632 GGCGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTTGAAGGTTG 19691 Query 143260 ATACTGCATCATAAAAACG 143278 | || |||||||| ||||| Sbjct 19692 AAACCGCATCATAGAAACG 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547849338878160