Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq101742 87.8 2e-12 >seq101742 Length=1472 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 6563 TAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACG-ACATG 6621 |||| ||| | ||| || || || || || | || |||||| | || ||| | ||| Sbjct 55 TAGACATGAGTATCACCTAAGGTGTGAACAAAGTCTCCAGGA-CAAAGTCCAGTTATATG 113 Query 6622 AGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCAT 6681 ||||||||||| |||||||| ||||| |||||| ||||| ||||| || || ||||| Sbjct 114 TGCGATCATGTAAGTGAGCAGGGCGTAGGAAGCAATATTGAATGGCACACCCAATCCCAT 173 Query 6682 GTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCA 6741 ||| | ||||| || | || || || ||||| || || || ||| | ||||| Sbjct 174 ATCTGCACTACGTTGGTACAATTGACAAGATAGCTCTCCGTTAGCAACGAAAAATTGCGC 233 Query 6742 GAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACAT 6801 || || ||||| || | ||||| | || | ||| ||| ||||| || |||| Sbjct 234 CAGACAATGACACGGTGGTAATGCCATTTGTGGTATATCAACCGGATTCCATGCAGACAT 293 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 34544 ATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTC 34603 |||| || ||||| ||| ||| | || | ||||| | || ||||| || || Sbjct 293 ATGTCTGCATGGAATCCGGTTGATATACCACAAATGGCATTACCACCGTGTCATTGTCTG 234 Query 34604 TGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGAC 34663 ||||| | ||| || || || ||||| || || || | || ||||| | ||| Sbjct 233 GCGCAATTTTTCGTTGCTAACGGAGAGCTATCTTGTCAATTGTACCAACGTAGTGCAGAT 174 Query 34664 ATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCT 34723 ||||| || || ||||| ||||| |||||| ||||| |||||||| ||||||||||| Sbjct 173 ATGGGATTGGGTGTGCCATTCAATATTGCTTCCTACGCCCTGCTCACTTACATGATCGCA 114 Query 34724 CATGT-CGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTA 34782 ||| | ||| || | |||||| || | || || || || || ||| | ||| |||| Sbjct 113 CATATAACTGGACTTTG-TCCTGGAGACTTTGTTCACACCTTAGGTGATACTCATGTCTA 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447483286329120