Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq101742 104 2e-17 >seq101742 Length=1472 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 118465 TTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCA 118524 |||| ||| ||||||||| | |||||||||||| ||| || | || || | || || Sbjct 31 TTCAATGGTTCAATGTGACTTTTATAGACATGAGTATCACCTAAGGTGTGAACAAAGTCT 90 Query 118525 CCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACA 118584 ||||| ||| || || | || || |||||||| || | || |||| || | | Sbjct 91 CCAGGACAAAGTCCAGTTATATGTGCGATCATGTAAGTGAGCAGGGCGTAGGAAGCAATA 150 Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCC 118644 || || || ||||||| ||||| ||||| | ||||||||||| ||||| ||||| Sbjct 151 TTGAATGGCACACCCAATCCCATATCTGCACTACGTTGGTACAATTGACAAGATAGCTCT 210 Query 118645 CCGTTTGCAACATAAAACTG 118664 ||||| ||||| |||| || Sbjct 211 CCGTTAGCAACGAAAAATTG 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413774418029944