Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq21876 149 1e-30 seq119770 134 3e-26 seq123102 131 4e-25 seq88566 120 7e-22 >seq21876 Length=2391 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||| || || || || || ||||| ||||| | | ||| | |||||| Sbjct 723 AGGACCAAATGAAGCGTTGATTCCTTCTGAATGTTGTAATCGGACAAGGTACGGCCATCT 664 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||||| |||||||| | || || || || || |||| ||| ||||||||| Sbjct 663 TCCAATTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCC 604 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || |||||||||||||||||||| ||||| || || ||||| ||| Sbjct 603 TGGATCTTAGCCTTAACGTTTTCGATGGTGTCAGACGGCTCAACTTCCAGGGTGATAGTC 544 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||| ||||| || | ||||| Sbjct 543 TTGCCAGTCAAAGTTTTTACGAAGATTTGCAT 512 Score = 116 bits (128), Expect = 9e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 210951 GTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACT 211010 |||| ||| || ||||| |||||||| |||||||| | |||||||| || ||||||| Sbjct 903 GTCCGTCCGTCCTCCAGTTGCTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGAATA 844 Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||| ||||| ||| ||||| || || ||||| || || || || Sbjct 843 CCTTCCTTGTCCTGAATCTTAGCTTTGACGTTCTCAATAGTGTCGGATGGCTCGACTTCT 784 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | |||||| || || || || | ||| ||||| || | ||||| Sbjct 783 AAAGTGATAGTTTTCCCTGTCAAAGTTTTTACGAAGATTTGCAT 740 >seq119770 Length=1537 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || |||||||| || || |||||||| || || || || | || || | ||||||||| Sbjct 884 ACCAGGTGAAGTGTTGATTCTTTTTGAATATTGTAGTCGGATAGAGTACGTCCATCTTCT 943 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | || || || ||||| ||||| |||||||| || || |||| ||||| || ||||| Sbjct 944 AATTGTTTTCCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCCTGA 1003 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| ||| || ||||| ||||||||||| || ||||| | ||||| ||||| Sbjct 1004 ATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCCACCTCTAAGGTGATGGTCTTG 1063 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || || || || | |||||||| Sbjct 1064 CCAGTTAGTGTTTTGACGAAAATTTGCATTTT 1095 >seq123102 Length=1410 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || || || ||||| ||||| ||||| | | || | |||||| Sbjct 605 AGAACCAAGTGAAGTGTTGATTCCTTTTGAATGTTGTAATCGGATAATGTGCGTCCATCC 664 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || | ||||||||||| || |||| |||||||| || Sbjct 665 TCAAGCTGCTTGCCGGCGAAAATTAAACGTTGTTGGTCTGGGGGAATGCCTTCCTTATCT 724 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || ||| ||| ||||| |||||||| || || |||||| || | ||||| || Sbjct 725 TGAATTTTTGCTTTAACGTTCTCGATGGTATCCGAAGGTTCAACTTCCAATGTGATAGTT 784 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | || || ||||| | ||||| Sbjct 785 TTGCCAGTCAATGTTTTAACAAATATTTGCAT 816 >seq88566 Length=1870 Score = 120 bits (132), Expect = 7e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||| ||||||||||| | | || | ||| ||||||||||| ||||| Sbjct 260 GTAGATTCCTTTTGAATGTTATAATCACCCAAAGTTCGTCCGTCTTCCAGCTGTTTGCCA 319 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | ||||| || || || |||| ||||||||| || || ||||| ||| Sbjct 320 GCAAAAATTAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCTTGAATCTTGGCTTTG 379 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || | ||| || || || || ||||||||| || ||||| || || ||||| || || Sbjct 380 ACATGTTCAATAGTATCGGAAGGTTCAACCTCAAGTGTGATGGTTTTACCCGTAAGGGTT 439 Query 211098 TTTACAAACACCTGCATTT 211116 || || || | ||||||| Sbjct 440 TTAACGAATATTTGCATTT 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157086939559790