Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq138766 113 4e-20 seq123102 93.3 4e-14 >seq138766 Length=1258 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| |||||||| ||||||| |||||||| | | || |||||||| || || ||||| Sbjct 831 CTCTTTCTGTATATTGTAATCGGAAAGTGTTCTTCCATCCTCAAGCTGCTTACCAGCAAA 772 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || | |||||| || | || | | |||||| ||| ||||| |||| | Sbjct 771 GATCAGTCTCTGCTGATCTGGTGGAATCCCCTCTTTATCCTGTATTTTGGCCTTGACATT 712 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | || | ||| | |||||| |||| || || |||||||||| || ||||| || Sbjct 711 CTCAACATTTTCGGATGGCTCCACCTCCAGTGTTATTGTTTTTCCCGTTAGTGTTTTTAC 652 Query 39273 AAAGATTTGCAT 39284 ||||||||||| Sbjct 651 GAAGATTTGCAT 640 >seq123102 Length=1410 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || || ||||| || || ||||||| | ||| ||| | || ||| Sbjct 608 ACCAAGTGAAGTGTTGATTCCTTTTGAATGTTGTAATCGGATAATGTGCGTCCATCCTCA 667 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || | ||| || ||||| | ||| | || || || || || Sbjct 668 AGCTGCTTGCCGGCGAAAATTAAACGTTGTTGGTCTGGGGGAATGCCTTCCTTATCT-TG 726 Query 39196 ATTTTCTGTTTGAGCGT-CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 | ||| || || | ||| | | | ||||| | || || |||| |||||| |||| Sbjct 727 AATTTTTGCTTTAACGTTCTCGATGGTATCCGAAGGTTCAACTTCCAATGTGATAGTTTT 786 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| ||||||||||| |||||||| Sbjct 787 GCCAGTCAATGTTTTAACAAATATTTGCAT 816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428817682092998