Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq14905 401 4e-107 >seq14905 Length=119551 Score = 401 bits (444), Expect = 4e-107 Identities = 683/995 (69%), Gaps = 55/995 (6%) Strand=Plus/Minus Query 78212 ATCACCAAGGCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGAT 78271 |||| ||| ||||| |||||||||||| || ||||| || | |||||| | Sbjct 7451 ATCAGCAAAGCCATTAACTGGAACAAGATCCAGGACGACAAAGATCTCGAGGTGTGGAAC 7392 Query 78272 CGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCC 78331 || || ||| ||| |||||| |||| || ||||| || | ||||||||||| || ||| Sbjct 7391 CGTCTGACCTCCAATTTCTGGCTGCCGGAAAAGGTCCCATTATCCAACGACATTCCTTCC 7332 Query 78332 TGGGACACCCTTA-CGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCAC 78390 |||| || || | |||| |||||||| | || || || || |||||||||||||| || Sbjct 7331 TGGGCGACGCTGAGCGCCA-AAGAGAAGCAGCTGACAATTCGCGTGTTCACCGGCCTGAC 7273 Query 78391 CCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACAC 78450 |||||||| || | ||| || || ||||| | |||| || |||||| ||| Sbjct 7272 GCTGCTCGATACGGTGCAGAACATTGTCGGCGCGCCCACGCTGATGAAAGACGCCGTCAC 7213 Query 78451 CCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTC 78510 |||||| ||||||||||| | | || ||| ||||||||| |||| ||||| || Sbjct 7212 CCCGCATGAGGAGGCGGTTTACTCGAATATCTGCTTCATGGAGGCGGTGCACGCACGCTC 7153 Query 78511 CTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTG 78570 |||||| ||||| ||||| ||||| ||| | | | ||||||| || | || || Sbjct 7152 CTACAGTTCGATTTTCTCGACGCTGTGCATGACTTCGGACGTTGACGACGCTTATCGCTG 7093 Query 78571 GTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGG 78630 | ||||| |||| ||||| ||||||| ||| |||| |||||| ||| Sbjct 7092 GAGTGAGGAAAACGTTGCGCTGCAAAACAAGGCCGCGATTATCCTCTCTTACTACAACGG 7033 Query 78631 CGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTC 78690 ||| || || |||| | ||| || ||||| | |||||||| ||||| ||||| || Sbjct 7032 CGAAGATCCGTTGATGAAGAAAGTCGCCAGCGTGTTCCTGGAGTCATTCCTGTTCTATTC 6973 Query 78691 GGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGT 78750 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| || | Sbjct 6972 GGGCTTCTATCTGCCAATGTACTGGTCGAGCCGCGCCAAGCTGACCAACACCGCCGATCT 6913 Query 78751 GATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCA 78810 ||| || |||| || || |||||||| || || || |||||||| || ||||| | ||| Sbjct 6912 GATTCGTCTGATCATTCGTGACGAAGCGGTGCACGGTTACTACATTGGCTACAAATTCCA 6853 Query 78811 GC------------------------------------GAGGCCTCGAGAC-CCAGGGGC 78833 | |||| | || || || | Sbjct 6852 ACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAGGCGTTGAAACTTGAGAGCG 6793 Query 78834 CGGCGCGGC--AGGCTGAGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGA 78891 || ||| | |||| || | ||||| | |||| || ||| | ||| || || || Sbjct 6792 AGGAGCGTCAAAGGC--AGGTTAAGGATCAGGCGTTTGACCTGATTCAGGACCTGTATGA 6735 Query 78892 CAACGAGTGTGACTACACCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAA 78951 |||||| | ||| ||||| |||| ||||||| || || | |||||| || || Sbjct 6734 CAACGAAATTCGCTATACCGAAGAGCTGTATGACGGTGTGGGTTGGAGCGAGGACGTTAA 6675 Query 78952 GAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTT 79011 ||| ||||||| ||||||| || || |||||||||||| | || ||||| || ||||| Sbjct 6674 GAAATTCCTGCATTACAACGCTAATAAAGCGCTGATGAACTTGGGTTACGAGGCGCTGTT 6615 Query 79012 CCCCAAGGAAGAGACCATGGCAG------ACCCGGCCATCATGTCCGCGCTCTCACCAGG 79065 ||| || | |||||| | ||||||| || |||| || | || ||| Sbjct 6614 CCC------AGCCAGCATGGCGGAAGTTAACCCGGCAATTCTGTCGGCATTATCGCCAAA 6561 Query 79066 CGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCGGCAAAGC 79125 || ||| || ||||||||||||||||| || || ||||| ||||| || || ||||| Sbjct 6560 CGCCGATGAAAACCACGACTTCTTCTCAGGTTCCGGCTCTTCTTACGTTATTGGTAAAGC 6501 Query 79126 TGAAGCCACGGCAGATGAGGACTGGGACTTCTGAT 79160 | || | ||| ||||||||||| |||| || Sbjct 6500 GGTCAATACCGAAGACGAGGACTGGGATTTCTAAT 6466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298814362694828