Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq128896 82.4 2e-11 >seq128896 Length=1494 Score = 82.4 bits (90), Expect = 2e-11 Identities = 179/266 (67%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 24266 AGCGGAAAGAACGTGACCGTCGATAAGGCCTTGCAGCTCTCGACGGTATGGGCGTGCGTG 24325 || ||||| | |||||||||||||| || | ||| || | || ||||| |||| Sbjct 1231 AGTGGAAAAACGGTGACCGTCGATAAAGCGATCATGCTGTCCGCCGTCTGGGCCTGCGCA 1290 Query 24326 CGGCTTCTCTCGGAGTCGGTGTCCACGCTGCCGCTGAAACTCTACCGGCGCCTTCCGGAC 24385 ||||| || || || || || |||||||| |||||| | || ||| |||| Sbjct 1291 CGGCTACTGAGTGAATCAGTCTCAACGCTGCCACTGAAAGTTTATAAGCGGGAAAAGGAC 1350 Query 24386 GGCTCCCGCGAGCAGGCCAAGGATCATCCG--CTGTTCAGGCTGCTTTGCCGTACGCCGA 24443 || || |||| || ||| | ||| || ||| || | || |||| || ||| | Sbjct 1351 GGTTCGCGCGCGCTGGCAATGGACCACCCGGCCTATAAAG--TGCTCTGTAAACAGCCCA 1408 Query 24444 ATGCCGAGATGACCCCGCAGCGCTTCATGCTGATGGTGGTGGCGAGCATCTGCCTGCGTG 24503 | | || ||||| || | |||||||||||| | ||||| || |||||| |||| | Sbjct 1409 ACGGAGAAATGACGCCATCCAGATTCATGCTGATGCTCGTGGCCAGTATCTGCATGCGGG 1468 Query 24504 GAAACGCCTTCGTCGAGAAGAAGATG 24529 | || || || |||| ||| |||| Sbjct 1469 GCAATGCTTTTATCGAAAAGTTGATG 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133644564969916