Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq973 172 8e-38 >seq973 Length=41428 Score = 172 bits (190), Expect = 8e-38 Identities = 303/436 (69%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 88180 AAGCAACTCATCTTCTCCACAGGGGAAGCCGGATGCGGTAAGACCTTCATGGCCACCGCC 88239 ||||| | || || ||||||| ||||| || || || || || || || | | || Sbjct 35700 AAGCAGTTGATTTTTGCCACAGGCGAAGCAGGTTGTGGCAAAACGTTTATCAGCGCTGCG 35759 Query 88240 TACGCGGTAGAGCGATTACTGGCCAAAGACGTCGATCGTATCATTGTCACTCGCCCTGTC 88299 | |||| |||| ||| | |||||| | || | || || || |||||||| || Sbjct 35760 AAAGCGGCAGAGGCGTTAATTCACAAAGAGATAGACAGGATTATAGTGACTCGCCCGGTA 35819 Query 88300 CTCTCCGCAGATGAAGACTTAGGCTTCCTGCCGGGCGATGTTGGTGAAAAGTTCGCGCCT 88359 || || |||||||| | || ||| |||| || ||| || || || || || ||| Sbjct 35820 CTGCAGGCCGATGAAGATCTCGGTTTCTTGCCTGGGGATATTTCAGAGAAATTTGCTCCT 35879 Query 88360 TACTTCCGACCTGTTTACGATGTGCTCTTAAAACGTCTGGGCAGCCGTTTCTTACAATAC 88419 || ||| | || |||||||| | ||| | ||| ||||| || | || || Sbjct 35880 TATTTCAGGCCAGTTTACGACATTCTCGTTCGTCGTTTGGGCTCTTCCTTTATGCAGTAT 35939 Query 88420 TGCCTGAAACCGGGTATAGACAAGGTTGAGATAGCTCCCTTCGCCTATATGCGTGGCCGC 88479 || ||| ||||| |||| ||||| || || || || || |||||||||||||| || Sbjct 35940 TGTCTGCGACCGGAAATAGGGAAGGTAGAAATTGCGCCATTTGCCTATATGCGTGGGCGT 35999 Query 88480 AACTTCGAGAACGCGGTCGTTATCTTAGATGAAGCTCAGAACACCACTGCTCAG-CAGAT 88538 | ||||| || ||||| || || | |||||||| |||||| ||| || ||| ||||| Sbjct 36000 ACTTTCGAAAATGCGGTGGTGATTCTGGATGAAGCCCAGAACGTCACAGC-CAGTCAGAT 36058 Query 88539 GAAGCTCTTCCTGACCCGTATCGGGGAGAACTGT-ATCGTTATCGTTAACGGTGACGTCA 88597 ||| | |||||||||||| |||| || || ||| | || || || ||||| || |||| Sbjct 36059 GAAAATGTTCCTGACCCGTCTCGGTGA-AAATGTGACGGTGATAGTCAACGGGGATGTCA 36117 Query 88598 CTCAGTGCGACTTACC 88613 | |||||||| |||| Sbjct 36118 CCCAGTGCGATCTACC 36133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715218731833200