Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq2788 134 2e-26 seq14905 131 2e-25 >seq2788 Length=136445 Score = 134 bits (148), Expect = 2e-26 Identities = 283/422 (67%), Gaps = 0/422 (0%) Strand=Plus/Minus Query 151964 CGTTTTTATGAAGCAGTATCTACTCGACAGATTTCATTGCCAACTCCTATTATGGCTGGT 152023 ||||| ||||| || || || || ||||||| |||| || || |||||| | || Sbjct 19710 CGTTTCTATGATGCGGTTTCAACCTTCAAGATTTCTCTGCCTACGCCAATTATGTCCGGC 19651 Query 152024 TGTCGTACTCCTACTCGACAGTTCAGTTCATGCGTTGTTATTGAGGCAGGAGATTCGCTG 152083 || || || ||||| |||||||| || ||||| | || ||| || || ||| Sbjct 19650 GTGCGCACCCCGACTCGCCAGTTCAGCTCTTGCGTACTGATCGAGTGCGGCGACAGCCTG 19591 Query 152084 AAGTCTATCAATAAGGCTTCTGCTTCAATTGTTGAATATATCTCCAAACGAGCTGGAATC 152143 | || ||||| | | || | || || |||| | || | || || || ||| Sbjct 19590 GACTCCATCAACGCGACCTCCAGCGCCATCGTGAAATACGTTTCACAGCGCGCAGGTATC 19531 Query 152144 GGCATTAACGTTGGTATGATTCGTGCCGAAGGTTCTAAGATTGGCATGGGTGAAGTACGC 152203 ||||| |||| ||| || ||||| ||| |||| || ||||||| | | Sbjct 19530 GGCATCAACGCTGGCCGCATCCGTGCGCTGGGTAGCCCGATTCGCGGCGGTGAAGCATTC 19471 Query 152204 CATACTGGTGTTATTCCTTTTTGGAAACATTTTCAGACTGCTGTTAAATCATGCTCACAG 152263 ||||| || ||| || || | || || || ||||| || |||||||| ||||| ||| Sbjct 19470 CATACCGGCTGTATCCCGTTCTATAAGCACTTCCAGACGGCGGTTAAATCCTGCTCTCAG 19411 Query 152264 GGTGGAATTCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGAA 152323 || || | || ||||| ||||| || | || || || ||||| ||||||||||| Sbjct 19410 GGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTCTACCCGATGTGGCACCTGGAAGTTGAA 19351 Query 152324 AATCTTCTCGTTTTGAAAAATAACAAAGGCGTAGAAGAAAACCGCATCCGTCATATGGAT 152383 | || || ||| ||||||| ||| || || |||| |||||| | ||||| ||||| Sbjct 19350 AGCCTGCTGGTTCTGAAAAACAACCGTGGTGTTGAAGGCAACCGCGTTCGTCACATGGAC 19291 Query 152384 TA 152385 || Sbjct 19290 TA 19289 >seq14905 Length=119551 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 62570 TGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCA 62629 |||||||||| || || |||||||| | || ||||| || || ||||| ||| |||| | Sbjct 42308 TGCGTCGTGAGACGCTCGAAGATGCGATAAAACATCCTGAGAAGTATCCTCAGTTGACTA 42367 Query 62630 TCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGACG 62689 ||||||| || || || || || || |||||||| |||| ||||||||||||| |||| Sbjct 42368 TCCGTGTCTCGGGGTACGCCGTGCGTTTTAACTCGTTGACGCCGGAACAGCAGCAGGACG 42427 Query 62690 TTATCGCTCGTACCTTCACCGAGAGTTTGTAA 62721 | ||| ||||||| ||||| |||| ||||| Sbjct 42428 TGATCACTCGTACTTTCACTCAGAGCCTGTAA 42459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545386427056800