Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq2788 141 9e-29 >seq2788 Length=136445 Score = 141 bits (156), Expect = 9e-29 Identities = 339/511 (66%), Gaps = 4/511 (1%) Strand=Plus/Plus Query 132529 GGGCTGAACAGTGTTATGTACCCATTTTTACCAAGACGTTCCATCATCAAATCATTGATT 132588 ||||||||||| || |||| || |||| | ||||| | ||||| | ||||| Sbjct 19220 GGGCTGAACAGAGTGATGTCGCCGCCTTTAACCAGACGCTGATACATCAGTTTGTTGATC 19279 Query 132589 TGCAGACCATAATCTAGATGACGAATACGGTTTTCATCTACACCTTTGTTGTTCTTTAAT 132648 |||| || || || | ||||||| ||||| | || ||||| |||||| || | Sbjct 19280 TGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAGA 19339 Query 132649 ACAAGCAGGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 132708 || |||||| |||||||||| || |||||||| || || | || || || ||||| || Sbjct 19340 ACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCCG 19399 Query 132709 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAAAGGAATT 132768 || || ||||| ||||| || ||||| || || ||||| || || || | || || || Sbjct 19400 CGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAACGGGATA 19459 Query 132769 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 132828 ||| ||||| | |||| || | ||| || || || || || Sbjct 19460 CAGCCGGTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAGCGCACGGATGCGGCCA 19519 Query 132829 GCGTTGATGCCTATACCAGCTCGCTTGCTGATA--TACTTAATAATACTGTTACTTGCCG 132886 ||||||||||| ||||| || |||| ||| | || || | || | | | || Sbjct 19520 GCGTTGATGCCGATACCTGCGCGCT--GTGAAACGTATTTCACGATGGCGCTGGAGGTCG 19577 Query 132887 CATTAATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAAGAACTAAATTGACGAG 132946 | || || || | ||| ||||| ||||| | ||| ||||| || || || |||| Sbjct 19578 CGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGAGCTGAACTGGCGAG 19637 Query 132947 TAGGAGTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAATCTGTCGAGTAGATACAG 133006 | || || || | || | ||||||||| ||||| | ||||||| || || || | Sbjct 19638 TCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTTGAAGGTTGAAACCG 19697 Query 133007 CATCATAAAAGCGAATAATATGCGCCAGACG 133037 ||||||| || || | || | ||||||| Sbjct 19698 CATCATAGAAACGCTTGATGTAGTCCAGACG 19728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510592606618080