Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031085.1 Length=166634 Score E Sequences producing significant alignments: (Bits) Value seq14905 150 2e-31 seq2788 122 9e-23 seq2551 93.3 4e-14 >seq14905 Length=119551 Score = 150 bits (166), Expect = 2e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 62745 TTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 62804 ||||| |||| ||| || ||||||| ||| ||||| ||||||||||||| |||| || Sbjct 42459 TTACAGGCTCTGAGTGAAAGTACGAGTGATCACGTCCTGCTGCTGTTCCGGCGTCAACGA 42400 Query 62805 GTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 62864 |||||| || || || || || || |||||||| |||| ||| ||||| || || ||||| Sbjct 42399 GTTAAAACGCACGGCGTACCCCGAGACACGGATAGTCAACTGAGGATACTTCTCAGGATG 42340 Query 62865 CTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACC 62924 || | |||||||| || || |||||||||| ||||| ||||| || || || || || Sbjct 42339 TTTTATCGCATCTTCGAGCGTCTCACGACGCATGACGTTAACGTTAAGATGCTGCCCCCC 42280 Query 62925 TTCAATTTTAACTGTAGGCTG 62945 ||| | ||| || ||||| Sbjct 42279 TTCTACGCGAACCGTTGGCTG 42259 >seq2788 Length=136445 Score = 122 bits (134), Expect = 9e-23 Identities = 322/492 (65%), Gaps = 0/492 (0%) Strand=Plus/Plus Query 140424 CGGACTGAACAAAGTAATGTAGTCGTTCTTTCCAAAACGTTCCATCATTAGATCATTCAG 140483 ||| ||||||| ||| |||| | || || | | ||| | ||| || | || | Sbjct 19219 CGGGCTGAACAGAGTGATGTCGCCGCCTTTAACCAGACGCTGATACATCAGTTTGTTGAT 19278 Query 140484 TTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACACCTTTGTTATTTTTCAA 140543 || || || || ||||| ||||||| |||||| |||| ||||| ||| ||||||| Sbjct 19279 CTGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAG 19338 Query 140544 AACAAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 140603 ||| || || |||||||||||| ||||| || || || | || ||||| ||||| Sbjct 19339 AACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCC 19398 Query 140604 ACGAATTCCACCTTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAAT 140663 || | || || || ||||| |||||||| || ||||| || || || | || || || Sbjct 19399 GCGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAACGGGAT 19458 Query 140664 AACACCAGTATGACGTACTTCACCCATGCCAATCTTAGAACCTTCGGCACGAATCATACC 140723 | || ||||| | ||||||| || |||| ||| ||||| || || Sbjct 19459 ACAGCCGGTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAGCGCACGGATGCGGCC 19518 Query 140724 AACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTT 140783 | |||| || || || || ||||| | || | |||| || || | ||| | | Sbjct 19519 AGCGTTGATGCCGATACCTGCGCGCTGTGAAACGTATTTCACGATGGCGCTGGAGGTCGC 19578 Query 140784 ATTGATAGACTTTAATGAATCACCTGCCTCAATAACAACACATGAACTAAACTGTCGAGT 140843 ||||| || | | || || ||| || | || || || || ||||| ||||| Sbjct 19579 GTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGAGCTGAACTGGCGAGT 19638 Query 140844 CGGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAAATCTGTCGAGTAGATACTGC 140903 ||| || || || | |||||| || || || | ||||||| || || || || Sbjct 19639 CGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTTGAAGGTTGAAACCGC 19698 Query 140904 TTCATAAAAACG 140915 ||||| ||||| Sbjct 19699 ATCATAGAAACG 19710 >seq2551 Length=53185 Score = 93.3 bits (102), Expect = 4e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 62757 AGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAAC 62816 |||||||||||| | || ||||| |||||||||| || || ||||| ||||| || Sbjct 37104 AGTAAAGGTACGGGTAATCACGTCCTGCTGCTGTTCTTTGGTTAGTGAGTTGAAGCGTAC 37045 Query 62817 TGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATC 62876 ||||| || || || ||||| |||||||| || |||| || |||| | | || || Sbjct 37044 CGCATAGCCTGAAACGCGGATAGTCAGCTGAGGGAATTTCTCAGGATTTTCCATGGCCTC 36985 Query 62877 TTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACCTTCAAT 62930 ||| | || || || ||||| |||||||| || ||||| ||||| || Sbjct 36984 CAGCAGCATCTCGCGGTTCATTACGTTAACGTTCAGATGCTGACCGCCTTCGAT 36931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532174230827040