Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq138766 113 1e-19 seq123102 102 2e-16 seq21876 98.7 2e-15 seq88566 93.3 1e-13 >seq138766 Length=1258 Score = 113 bits (124), Expect = 1e-19 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || || || |||||||| | ||||||||||| || || |||||||||| | ||||| Sbjct 857 AGCCTCAGAACAAGATGGATTGTAGACTCTTTCTGTATATTGTAATCGGAAAGTGTTCTT 798 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || || || ||||| || |||||||| || | | || || || Sbjct 797 CCATCCTCAAGCTGCTTACCAGCAAAGATCAGTCTCTGCTGATCTGGTGGAATCCCCTCT 738 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || ||||| |||||| |||| || | || || ||| || || || || Sbjct 737 TTATCCTGTATTTTGGCCTTGACATTCTCAACATTTTCGGATGGCTCCACCTCCAGTGTT 678 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106 || ||||| ||||| || || || ||||||| ||||||| Sbjct 677 ATTGTTTTTCCCGTTAGTGTTTTTACGAAGATTTGCATTT 638 >seq123102 Length=1410 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || ||||| ||||||||||||| ||| || | ||||| || | Sbjct 610 CAAG-TGAAGTGTTGATTCCTTTTGAATGTTGTAATCGGATAATGTGCGTCCATCCTCAA 668 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || |||||||| || | | || ||||| | | || |||||||| ||||||| Sbjct 669 GCTGCTTGCCGGCGAAAATTAAACGTTGTTGGTCTGGGGGAATGCCTTCCTTATCTTGAA 728 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||| ||| || |||| | | | || ||| || ||||| | || |||||||||| Sbjct 729 TTTTTGCTTTAACGTTCTCGATGGTATCCGAAGGTTCAACTTCCAATGTGATAGTTTTGC 788 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || || || | ||||| Sbjct 789 CAGTCAATGTTTTAACAAATATTTGCAT 816 >seq21876 Length=2391 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | |||||| || || || || || ||||||||||||| || || | |||||| Sbjct 723 AGGACCAAATGAAGCGTTGATTCCTTCTGAATGTTGTAATCGGACAAGGTACGGCCATCT 664 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||||||||| | | |||||| || | | ||||| ||||| || Sbjct 663 TCCAATTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCC 604 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | | |||| || ||| ||||| || || ||||| Sbjct 603 TGGATCTTAGCCTTAACGTTTTCGATGGTGTCAGACGGCTCAACTTCCAGGGTGATAGTC 544 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | ||| || ||||||| ||||| Sbjct 543 TTGCCAGTCAAAGTTTTTACGAAGATTTGCAT 512 >seq88566 Length=1870 Score = 93.3 bits (102), Expect = 1e-13 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||| || ||||| ||||| ||||| | ||||||| || ||||| || ||| || Sbjct 260 GTAGATTCCTTTTGAATGTTATAATCACCCAAAGTTCGTCCGTCTTCCAGCTGTTTGCCA 319 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | | ||||| || | | ||||||||||| |||||||| || |||| Sbjct 320 GCAAAAATTAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCTTGAATCTTGGCTTTG 379 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| || | | || ||| || || ||||| || || ||||| ||||| || || Sbjct 380 ACATGTTCAATAGTATCGGAAGGTTCAACCTCAAGTGTGATGGTTTTACCCGTAAGGGTT 439 Query 152088 TTCACGAAGACCTGCATTT 152106 || ||||| | ||||||| Sbjct 440 TTAACGAATATTTGCATTT 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151765237235866