Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq48654 107 6e-19 >seq48654 Length=89670 Score = 107 bits (118), Expect = 6e-19 Identities = 230/338 (68%), Gaps = 7/338 (2%) Strand=Plus/Plus Query 36440 ACCACCAAGCATCTGCATCACGCCGCCCATCTGCGGAATGACAATCTCTGTGGTGTATCT 36499 |||||| ||||||||||| ||| || | | | || || || ||||||||| | Sbjct 37290 ACCACCCAGCATCTGCATGGTGCCACCAACGT---TTACCACGATTTCGGTGGTGTATTT 37346 Query 36500 GTCTATTCCGTTGCTG-TCAGTCCATTTACGAGTACGAAGCTGGCCTTCGATGTAAACCT 36558 || | ||| ||| || ||||| ||||| || | || |||||| || ||||||| Sbjct 37347 TTCAACACCG-GCCTGATCGGTCCACTTACGGGTTTGCAGTGCGCCTTCAATATAAACCT 37405 Query 36559 GCGAACCTTTTCGAAGGTATTCTCCTGCAACTTCCGCAAGTTTCCCGAATATGACAATAC 36618 | || ||||| || |||||||| || || ||||| || ||||| ||||| | |||| | Sbjct 37406 GAGAGCCTTTACGCAGGTATTCGCCCGCGACTTCTGCGAGTTTGCCGAACAACACAACGC 37465 Query 36619 GATGCCACTCTGTCTGTTCTTTCTTTTCTCCTGTCTGCTTATCTTTCCACTGCTCAGATG 36678 | ||||| || || | ||||||| || || ||| ||| || ||| ||||| | Sbjct 37466 GGTGCCATTCAGTTTTCTCTTTCTGCTCGCCGGTCGCCTTGTCGCGCCAGCTTTCAGAAG 37525 Query 36679 TTGCAACGGAAATGTTGACAATTGCAGAACC-TGATGCTGAATATTTAACTTCAGGGTCG 36737 |||| | || || ||| ||| ||| || | | || ||| ||||| || || Sbjct 37526 TTGCCAGGGTGATATTGGCAACAGCACCGCCGTTAGGC-ATATAGCGGACTTCGGGATCC 37584 Query 36738 TTTCCGAGAGTTCCGACAATAATTACTTTATTTACGCC 36775 | || ||| | || || | ||| ||||| |||||||| Sbjct 37585 TGACCCAGATTCCCAACCAGAATCACTTTGTTTACGCC 37622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151832084592552