Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031928.1 Length=169936 Score E Sequences producing significant alignments: (Bits) Value seq2788 149 7e-31 >seq2788 Length=136445 Score = 149 bits (164), Expect = 7e-31 Identities = 301/447 (67%), Gaps = 0/447 (0%) Strand=Plus/Plus Query 143367 CATCAGGTCGTTCAACTGGATTCCATAGTCCATATGACGAATACGGTTCTCATCGACACC 143426 |||||| | ||| | ||| | || |||||||| ||||||| ||||| | || ||||| Sbjct 19264 CATCAGTTTGTTGATCTGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACC 19323 Query 143427 CTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 143486 ||||||||||||||| ||||| |||||||||||| ||||| || || || | Sbjct 19324 ACGGTTGTTTTTCAGAACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAG 19383 Query 143487 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 143546 || ||||| ||||| || | || || || || || |||||||| || |||||||| || Sbjct 19384 GGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTG 19443 Query 143547 TTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTC 143606 || |||| || ||| |||||||| |||| || || ||| | ||| Sbjct 19444 CTTATAGAACGGGATACAGCCGGTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAG 19503 Query 143607 AGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTAT 143666 ||||| || ||| ||||||| || ||||| || || | |||| ||||| | || Sbjct 19504 CGCACGGATGCGGCCAGCGTTGATGCCGATACCTGCGCGCTGTGAAACGTATTTCACGAT 19563 Query 143667 TGAGTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGA 143726 | | | | || ||| || || | ||| |||||| || || | || ||||| Sbjct 19564 GGCGCTGGAGGTCGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGA 19623 Query 143727 ACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAACCTG 143786 || || || || || || || || | || | |||||| || || || | |||| || Sbjct 19624 GCTGAACTGGCGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTT 19683 Query 143787 ACGGGTACTTACAGCATCATAAAAACG 143813 ||| || |||||||| ||||| Sbjct 19684 GAAGGTTGAAACCGCATCATAGAAACG 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542722265631360