Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031934.1 Length=168929 Score E Sequences producing significant alignments: (Bits) Value seq2788 170 2e-37 >seq2788 Length=136445 Score = 170 bits (188), Expect = 2e-37 Identities = 308/448 (69%), Gaps = 2/448 (0%) Strand=Plus/Plus Query 142448 CATCAGGTCGTTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACC 142507 |||||| | ||| | ||| | ||||||||||| ||||||| ||||| | || ||||| Sbjct 19264 CATCAGTTTGTTGATCTGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACC 19323 Query 142508 CTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 142567 ||||||||||||||| ||||| |||||||||||| ||||| || || || | Sbjct 19324 ACGGTTGTTTTTCAGAACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAG 19383 Query 142568 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 142627 || ||||| ||||| || | || || || || || |||||||| || |||||||| || Sbjct 19384 GGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTG 19443 Query 142628 TTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTC 142687 || |||| || ||| |||||||| |||| || || ||| | ||| Sbjct 19444 CTTATAGAACGGGATACAGCCGGTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAG 19503 Query 142688 AGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTAT 142747 ||||| || ||| ||||||| || |||||||| || | |||| ||||| | || Sbjct 19504 CGCACGGATGCGGCCAGCGTTGATGCCGATACCTGCGCGCTGTGAAACGTATTTCACGAT 19563 Query 142748 TGAGTTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCGGCTTCAATAACCACACAAGA 142807 | | | | || ||| || || | ||| ||||||| || || | || ||||| Sbjct 19564 GGCGCTGGAGGTCGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGA 19623 Query 142808 ACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTAGGCAATGAAA-CCT 142866 || || || || || || || || | || | |||||| || ||||||| |||| | | Sbjct 19624 GCTGAACTGGCGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTT 19683 Query 142867 GACGAGTACTTACAGCATCATAAAAACG 142894 || | || || |||||||| ||||| Sbjct 19684 GAAG-GTTGAAACCGCATCATAGAAACG 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539505466404240