Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq21876 105 5e-18 seq123102 102 6e-17 seq138766 86.0 5e-12 seq119770 82.4 5e-11 >seq21876 Length=2391 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| |||||||| ||||| || ||||||||||||| | || | || | || || Sbjct 720 ACCAAATGAAGCGTTGATTCCTTCTGAATGTTGTAATCGGACAAGGTACGGC-CATCTTC 662 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| ||||| |||||||||||||||| || | || ||||| ||| Sbjct 661 CAATTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTG 602 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | |||||||| | | || || |||| || || ||||| Sbjct 601 GATCTTAGCCTTAACGTTTTCGATGGTGTCAGACGGCTCAACTTCCAGGGTGATAGTCTT 542 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || |||||||||||||| Sbjct 541 GCCAGTCAAAGTTTTTACGAAGATTTGCAT 512 Score = 89.7 bits (98), Expect = 4e-13 Identities = 116/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240 |||| ||||| ||||| || || ||||| ||||| || ||||||| ||| | |||||||| Sbjct 896 CGTCCTCCAGTTGCTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCTTCCT 837 Query 44241 TTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 | ||| ||||| |||| | |||| | || ||||||| | || || || | || Sbjct 836 TGTCCTGAATCTTA-GCTTTGACGTTCTCAATAGTGTCGGATGGCTCGACTTCTAAAGTG 778 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || | || || |||||||||||||| Sbjct 777 ATAGTTTTCCCTGTCAAAGTTTTTACGAAGATTTGCAT 740 >seq123102 Length=1410 Score = 102 bits (112), Expect = 6e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || |||| |||||| || |||||||| |||||||| Sbjct 583 TTGCATACCACCCCGCAGACGCAGAACCAAGTGAAGTGTTGATTCCTTTTGAATGTTGTA 642 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| | | ||| | || || |||||||| ||||| || || ||||| || || || Sbjct 643 ATCGGATAATGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAAATTAAACGTTGTTGGTC 702 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||||| | | | | || ||||| || |||| | ||||| || | | Sbjct 703 TGGGGGAATGCCTTCCTTAT-CTTGAATTTTTGCTTTAACGTTCTCGATGGTATCCGAAG 761 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| || || || || || || | || || || || |||||||| Sbjct 762 GTTCAACTTCCAATGTGATAGTTTTGCCAGTCAATGTTTTAACAAATATTTGCAT 816 >seq138766 Length=1258 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || || || |||||||||| ||| | | || || |||||||| || ||||| Sbjct 831 CTCTTTCTGTATATTGTAATCGGAAAGTGTTCTTCCATCCTCAAGCTGCTTACCAGCAAA 772 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| | ||||||||||| || | || || || ||| ||| || ||| | | Sbjct 771 GATCAGTCTCTGCTGATCTGGTGGAATCCCCTCTTTATCCTGTATTTTGGCCTTGACATT 712 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | | |||| | |||||||||| || || || |||||||| || || || || Sbjct 711 CTCAACATTTTCGGATGGCTCCACCTCCAGTGTTATTGTTTTTCCCGTTAGTGTTTTTAC 652 Query 44326 GAAGATTTGCAT 44337 |||||||||||| Sbjct 651 GAAGATTTGCAT 640 >seq119770 Length=1537 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| ||||||||||| || || ||||| || ||||| |||| || || | || Sbjct 880 CAATACCAGGTGAAGTGTTGATTCTTTTTGAATATTGTAGTCGGATAGAGTACGTCCATC 939 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || | || || ||||| || || | ||| || ||||||| || | |||||| || || Sbjct 940 TTCTAATTGTTTTCCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATC 999 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | ||||| || | || | |||||||| | | |||||||| | || || || Sbjct 1000 CTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCCACCTCTAAGGTGATGGT 1059 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || || || || ||||| |||||||| Sbjct 1060 CTTGCCAGTTAGTGTTTTGACGAAAATTTGCAT 1092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359380351943382