Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq16112 98.7 8e-16 >seq16112 Length=40353 Score = 98.7 bits (108), Expect = 8e-16 Identities = 225/339 (66%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || || || || || ||||| || || || ||||||||||||||||| ||||| ||||| Sbjct 33765 GGTGATCTCGGTCCGATTTATGGATTTCAATGGAGACATTTTGGAGCCGAATACAAAGAT 33706 Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908 || | |||| | |||| | ||||| | ||| | |||||||||| ||| Sbjct 33705 ATGCATACCGACTACACGAATAAAGGCGTAGATCAATTAAAAAATATTATAGATACCATT 33646 Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968 |||| |||||||| || |||| || ||| | |||||||| ||| | ||| Sbjct 33645 AAAAATAACCCAGACGATAGAAGAATAATCCTATGTGCGTGGAATCCTCTTGATTTGCCC 33586 Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028 |||| | ||||||| ||||| || ||||| || | | || || ||| || Sbjct 33585 AAGATGGCATTACCTCCTTGTCATTGTCTAGTGCAGTTCTATGCGGTGAATGGAGAACTA 33526 Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCT 19088 || |||| | | || || | || | || ||||| | || ||||| || || ||||| Sbjct 33525 TCATGCCTAATGTATCAACGTTCAGCCGACATGGGTTTAGGTGTACCTTTTAATATTGCC 33466 Query 19089 GGATATGCACTTCTTACCTACATAGTAGCGCATGTTACA 19127 | || || | || || | || | || ||||||||| Sbjct 33465 AGTTACGCCTTGCTCACTTGTATGATCGCACATGTTACA 33427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399344673185535