Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq16112 143 2e-29 >seq16112 Length=40353 Score = 143 bits (158), Expect = 2e-29 Identities = 243/347 (70%), Gaps = 4/347 (1%) Strand=Plus/Plus Query 101748 GATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCA 101807 |||| || ||||| || ||||| ||||| | | | || || ||||| ||||| || | Sbjct 33423 GATTTGTAACATGTGCGATCATACAAGTGAGCAAGGCGTAACTGGCAATATTAAAAGGTA 33482 Query 101808 CTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT-CACAG 101866 | ||||| ||||| || ||||| | |||||||| | | || || || | ||||| ||| | Sbjct 33483 CACCTAAACCCATGTCGGCTGAACGTTGATACATTAGGCATGATAGTTCTCCATTCACCG 33542 Query 101867 ACATAAAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||| || || ||| | | ||||||||| || || |||| || || | || | Sbjct 33543 -CATAGAACTGCACTAGACA-ATGACAAGGAGGTAATGCCATCTTGGGCAAATCAAGAGG 33600 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 |||||| ||||| | | || |||||||| ||||| |||| || ||||| || | Sbjct 33601 ATTCCACGCACATAGGATTATTCTTCTATCGTCTGGGTTATTTTTAATGGTATCTATAAT 33660 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGC 102045 | ||||||||| || || |||| | || ||| | | |||| ||||| || Sbjct 33661 ATTTTTTAATTGATCTACGCCTTTATTCGTGTAGTCGGTATGCATATCTTTGTATTCGGC 33720 Query 102046 TCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 ||| ||||| ||||| ||||||||||| | || || ||||| |||| Sbjct 33721 TCCAAAATGTCTCCATTGAAATCCATAAATCGGACCGAGATCACCTT 33767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361107128844473