Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq16112 205 1e-47 seq20950 172 8e-38 seq23131 158 2e-33 seq2123 141 1e-28 seq19760 138 2e-27 seq11882 122 1e-22 >seq16112 Length=40353 Score = 205 bits (226), Expect = 1e-47 Identities = 255/348 (73%), Gaps = 5/348 (1%) Strand=Plus/Plus Query 205440 ATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTAC 205499 ||| || | |||||| |||||| |||| | || ||||| |||| |||||| ||||| Sbjct 33424 ATTTGTAACATGTGCGATCATACAAGTGAGCAAGGCGTAACTGGCAATATTAAAAGGTAC 33483 Query 205500 ACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATT-ATTAA 205558 |||||||||||| || ||||| | |||||||||| | |||| ||| || | ||| | Sbjct 33484 ACCTAAACCCATGTCGGCTGAACGTTGATACATTAGGCATG----ATAGTTCTCCATTCA 33539 Query 205559 TTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAG 205618 ||| || || || | |||||||||||| |||| |||| || | ||| | || Sbjct 33540 CCGCATAGAACTGCACTAGACAATGACAAGGAGGTAATGCCATCTTGGGCAAATCAAGAG 33599 Query 205619 GATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAA 205678 ||||||| || || ||||| ||||| || || |||||||| || ||| ||||| Sbjct 33600 GATTCCACGCACATAGGATTATTCTTCTATCGTCTGGGTTATTTTTAATGGTATCTATAA 33659 Query 205679 TATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAG 205738 ||| | |||||||||| | |||| ||| || || | |||| |||||| | |||| | Sbjct 33660 TATTTTTTAATTGATCTACGCCTTTATTCGTGTAGTCGGTATGCATATCTTTGTATTCGG 33719 Query 205739 CACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTT 205786 | |||||||| | ||||||||| ||||||| ||||| | |||||||| Sbjct 33720 CTCCAAAATGTCTCCATTGAAATCCATAAATCGGACCGAGATCACCTT 33767 >seq20950 Length=58994 Score = 172 bits (190), Expect = 8e-38 Identities = 181/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || |||| || ||||| || |||||||| ||| |||| | ||| || | Sbjct 38107 ATGCAAATTTTCGTAAAAACTCTAACCGGTAAAACTATTACTCTAGAAGTCGAACCATCT 38166 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || ||||| ||||| ||||| ||||| ||||| || ||||||||| Sbjct 38167 GATACGATTGAAAACGTAAAAGCTAAAATACAAGACAAAGAGGGTATTCCGCCTGATCAA 38226 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || || |||||||| || ||| | |||||||| ||||||||| Sbjct 38227 CAACGATTAATCTTCGCTGGTAAACAATTGGAAGATGGCCGAACATTGAGTGATTATAAT 38286 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||| ||||| ||| | ||||| || ||||| ||||| ||||| || ||| || Sbjct 38287 ATTCAAAAGGAATCCACTCTTCATTTAGTATTACGATTACGCGGTGGAATGCAAATTT 38344 Score = 163 bits (180), Expect = 4e-35 Identities = 185/247 (75%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| |||| || |||| || |||||||| ||| | || | || || Sbjct 37879 ATGCAAATTTTTGTAAAAACGTTAACTGGTAAAACTATTACTTTGGAAGTAGAGCCATCC 37938 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | ||| ||||| ||||||||||||||||| ||||| || || Sbjct 37939 GACACTATCGAGAACGTGAAAGCTAAAATCCAAGATAAAGAAGGTATCCCACCCGACCAG 37998 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || ||||||||||| ||| | ||||| ||| |||||||| Sbjct 37999 CAACGATTAATTTTTGCCGGCAAACAATTAGAAGATGGCCGAACTTTAAGTGATTATAAC 38058 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 |||||||||||||| ||| | ||| |||| | |||||||| |||||||| ||| ||| Sbjct 38059 ATTCAAAAAGAATCTACTCTTCATCTGGTACTTCGTTTACGTGGTGGTATGCAAATTTTC 38118 Query 124778 ATAAAAA 124784 |||||| Sbjct 38119 GTAAAAA 38125 Score = 145 bits (160), Expect = 1e-29 Identities = 181/247 (73%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || ||| |||| || || ||||| ||| | || | ||| | Sbjct 37423 ATGCAAATTTTCGTGAAAACATTAACTGGTAAGACTATTACTCTGGAAGTCGAACCGTCC 37482 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | ||| |||||||| || |||||||| || |||||||| || Sbjct 37483 GACACGATTGAAAACGTTAAAGCTAAAATTCAGGACAAAGAAGGAATCCCACCTGACCAG 37542 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || ||||||||||| || || | ||||| ||| ||||||||| Sbjct 37543 CAACGATTAATTTTCGCTGGAAAACAATTGGAAGACGGCCGAACTTTAAGCGATTATAAT 37602 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 ||||| |||||||| ||| | |||||||| | ||| |||| |||||||| ||| |||| Sbjct 37603 ATTCAGAAAGAATCTACTCTTCATTTGGTGCTTCGTCTACGTGGTGGTATGCAAATATTC 37662 Query 124778 ATAAAAA 124784 | |||| Sbjct 37663 GTTAAAA 37669 Score = 141 bits (156), Expect = 1e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || ||| |||| || || ||||| ||| | || | ||| | Sbjct 37195 ATGCAAATTTTCGTGAAAACATTAACTGGTAAGACTATTACTCTGGAAGTCGAACCGTCC 37254 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | ||| |||||||| || |||||||| || |||||||| || Sbjct 37255 GACACGATTGAAAACGTTAAAGCTAAAATTCAGGACAAAGAAGGAATCCCACCTGACCAG 37314 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || |||||||||||||| || ||||||| || ||||||||| Sbjct 37315 CAACGATTAATTTTCGCCGGAAAACAATTAGAAGACGGTCGAACTTTGAGCGATTATAAT 37374 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| |||||||| ||| | ||||| || | ||| |||| |||||||| ||| || Sbjct 37375 ATTCAGAAAGAATCTACTCTTCATTTAGTACTTCGTCTACGCGGTGGTATGCAAATTT 37432 Score = 136 bits (150), Expect = 6e-27 Identities = 173/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| |||| || | || || |||||||| ||| | || | || || Sbjct 36967 ATGCAAATTTTTGTAAAAACGTTGACTGGTAAAACTATTACTTTGGAAGTAGAGCCATCC 37026 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | ||| |||||||| || |||||||| || |||||||| || Sbjct 37027 GACACTATCGAGAACGTGAAAGCTAAAATTCAGGACAAAGAAGGAATCCCACCTGACCAG 37086 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || |||||||||||||| || | ||||| || ||||||||| Sbjct 37087 CAACGATTAATTTTCGCCGGAAAACAATTAGAAGACGGCCGAACTTTGAGCGATTATAAT 37146 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| |||||||| ||| | ||||| || | ||| |||| |||||||| ||| || Sbjct 37147 ATTCAGAAAGAATCTACTCTTCATTTAGTACTTCGTCTACGCGGTGGTATGCAAATTT 37204 Score = 136 bits (150), Expect = 6e-27 Identities = 173/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| | || || ||||| || |||||||| ||| | || ||||| | Sbjct 37651 ATGCAAATATTCGTTAAAACTCTAACTGGTAAAACTATTACTCTGGAAGTTGAACCGTCC 37710 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || ||||| |||||||||||||| || ||||||||||| Sbjct 37711 GACACGATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGCATTCCACCTGATCAG 37770 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||| || || ||||| || || ||| || ||||||| ||||| ||| Sbjct 37771 CAAAGATTAATTTTCGCCGGCAAACAGTTGGAAGATGGTAGAACATTGAGTGATTACAAT 37830 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| ||||| || || | ||||| || | ||| | || || ||||| ||| || Sbjct 37831 ATTCAGAAAGAGTCTACCCTTCATTTAGTACTTCGTCTCCGTGGGGGTATGCAAATTT 37888 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | || || | || || ||||| || || |||| | ||| || Sbjct 38334 AATGCAAATTTTCGTGAAAACGTTGACTGGTAAAACAATTACATTAGAAGTCGAACCATC 38393 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| || ||| | ||| || |||||||| ||||||||||| ||||| || || Sbjct 38394 TGATACCATCGAAAATGTTAAAGCCAAGATTCAAGACAAAGAAGGTATCCCACCCGACCA 38453 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || || || || |||||||| || ||| |||| || ||| || || || Sbjct 38454 GCAACGTCTAATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACTTTAAGCGACTACAA 38513 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 |||||| ||||| ||| | ||||||||| | | ||||| ||||| Sbjct 38514 TATTCAGAAAGAGAGTACTCTTCATTTGGTTCTTAGATTACGCGGTGG 38561 >seq23131 Length=98978 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || |||| || ||||| || || | || ||||| | | Sbjct 83565 ATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACCATTACGCTTGAAGTTGAACCTAGC 83624 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | ||| ||||||||||||||||||||||| || || ||||| Sbjct 83625 GACACGATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGTATCCCTCCCGATCAG 83684 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || |||||||| | || ||| || |||| ||| |||||||||| Sbjct 83685 CAACGTTTGATCTTCGCCGGAAAACAGCTTGAAGATGGTAGAACCTTATCAGATTATAAT 83744 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| |||||||| ||||| ||| ||||||| |||| ||||| Sbjct 83745 ATTCAAAAAGAGTCAACTTTACATTTAGTTCTACGTTTGAGAGGCGGTAT 83794 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || | || || |||||||| ||| | || | || | | Sbjct 82197 ATGCAGATCTTTGTGAAAACGTTGACTGGTAAAACTATCACTCTCGAAGTCGAGCCTAGC 82256 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | ||| ||||||||||||||||||||||| || || ||||| Sbjct 82257 GACACAATTGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATCCCGCCCGATCAG 82316 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| ||||||||| | || ||| || |||| | || || ||| Sbjct 82317 CAACGTTTAATTTTTGCCGGAAAACAACTTGAAGATGGTAGAACTCTTTCGGACTACAAT 82376 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||| || |||||||||| | |||||| |||| ||||| ||| || Sbjct 82377 ATTCAAAAAGAATCCACCCTGCATTTGGTCCTTCGTTTAAGAGGAGGTATGCAAATTT 82434 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || | || || || || || ||| | || ||||| | | Sbjct 83337 ATGCAAATCTTCGTTAAAACTTTGACTGGAAAGACAATCACTCTTGAAGTTGAACCTAGC 83396 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | ||| |||||||||||||||||||| || || ||||||||| Sbjct 83397 GACACGATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAA 83456 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || || ||||| | || ||| |||| || | ||||||||| Sbjct 83457 CAACGTCTCATTTTCGCCGGTAAACAGCTCGAAGATGGTCGTACTCTTTCGGATTATAAT 83516 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||| || |||||||| ||| | |||||| |||| ||||| ||| || Sbjct 83517 ATTCAAAAAGAATCTACCTTGCATTTAGTTCTTCGTTTAAGAGGAGGTATGCAAATTT 83574 Score = 132 bits (146), Expect = 7e-26 Identities = 194/271 (72%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || | || |||||||| || ||| | || |||| | | Sbjct 83109 ATGCAAATTTTCGTCAAAACCTTGACCGGCAAAACCATCACTCTCGAAGTTGAGCCTAGC 83168 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| |||| ||||| |||||||||||||| || || || || || Sbjct 83169 GATACTATTGAAAATGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCTCCCGACCAG 83228 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || || || ||| | || || || |||| | || ||||| Sbjct 83229 CAACGTCTCATTTTCGCCGGTAAGCAACTCGAAGACGGTAGAACTCTTTCCGACTATAAC 83288 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 |||||||||||||| ||||| ||||||||| | ||||| |||| ||||| ||| ||| Sbjct 83289 ATTCAAAAAGAATCGACTTTACATTTGGTTCTCCGTTTGAGAGGAGGTATGCAAATCTTC 83348 Query 124778 ATAAAAA--TTGATTGTAAATAAATATCACT 124806 | |||| |||| || ||| | | |||||| Sbjct 83349 GTTAAAACTTTGACTGGAAAGACA-ATCACT 83378 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || | || |||||||| || || | || |||| | | Sbjct 82425 ATGCAAATTTTCGTCAAAACCTTGACCGGCAAAACCATCACCCTTGAAGTTGAGCCTAGC 82484 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | ||| ||||||||||||||||||||||| || || || || Sbjct 82485 GACACAATTGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCTCCCGACCAG 82544 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || ||||||||| | || || | |||| | || ||||| Sbjct 82545 CAACGTTTGATCTTCGCCGGAAAACAACTTGAAGACGGCAGAACTCTTTCGGACTATAAC 82604 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| || |||||||||||| | |||||| |||| ||||| Sbjct 82605 ATCCAAAAAGAATCCACGTTGCATTTGGTTCTCCGTTTAAGAGGAGGTAT 82654 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || |||| |||||||| || ||| | || | || | | | Sbjct 84021 ATGCAAATTTTCGTCAAAACCTTAACTGGCAAAACCATCACTCTCGAAGTCGAGCCTAGT 84080 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | || ||||||||||| || ||||| || || |||||||| Sbjct 84081 GACACTATCGAAAACGTCAAGGCTAAAATTCAAGACAAGGAAGGAATTCCTCCTGATCAG 84140 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || || || ||||| || ||| ||||||| | ||||| || Sbjct 84141 CAACGTCTCATTTTCGCCGGCAAGCAATTGGAAGATGGTCGAACTCTTTCTGATTACAAC 84200 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 ||||| |||||||| || ||||| ||||||||||| | || ||||||| Sbjct 84201 ATTCAGAAAGAATCTACATTGCACTTGGTTTTACGACTTCGTGGTGGTA 84249 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || ||||||| | || || |||||||| || |||| | || | | Sbjct 81969 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAAACTATCACCTTAGAAGTCGAGCCTAGC 82028 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| |||||||||||||| |||||||| || || || || Sbjct 82029 GATACCATTGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAG 82088 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || ||||||||| | || || | |||| | || ||||| Sbjct 82089 CAACGTTTGATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACTCTTTCGGACTATAAC 82148 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| || |||||||| ||| | ||||| |||| ||||| Sbjct 82149 ATCCAAAAAGAATCCACGTTGCATTTAGTTCTCCGTTTGAGAGGAGGTAT 82198 Score = 114 bits (126), Expect = 2e-20 Identities = 190/271 (70%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || | || || ||||| || || | || | || | | Sbjct 81740 AATGCAGATCTTTGTGAAAACGTTGACTGGTAAAACCATCACCCTCGAAGTCGAGCCTAG 81799 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| || | ||| || |||||||||||||||||||| || || ||||| Sbjct 81800 TGACACCATTGAAAACGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCCGATCA 81859 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || || || ||||||||| | || || | |||| | || || || Sbjct 81860 GCAACGTCTCATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACTCTTTCGGACTACAA 81919 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || |||||||||||||| |||||||| ||| | ||||| |||| ||||| ||| || Sbjct 81920 CATCCAAAAAGAATCAACCTTGCATTTAGTTCTCCGTTTGAGAGGAGGTATGCAAATCTT 81979 Query 124777 CATAAAAA--TTGATTGTAAATAAATATCAC 124805 | |||| | |||| || || || |||||| Sbjct 81980 CGTAAAGACCTTGACTGGTAA-AACTATCAC 82009 Score = 111 bits (122), Expect = 2e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||||||||||||||||||||| || || || || ||| | | || || || |||||| Sbjct 82737 AAAATTCAAGATAAAGAAGGTATTCCTCCCGACCAGCAACGTTTGATCTTCGCCGGAAAA 82796 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | || || | |||| | || ||||| || ||||||||||| || |||||| Sbjct 82797 CAACTTGAAGACGGCAGAACTCTTTCGGACTATAACATCCAAAAAGAATCCACGTTGCAT 82856 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| | |||||| |||| ||||| Sbjct 82857 TTGGTTCTCCGTTTAAGAGGAGGTAT 82882 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||||||||||||||||||||| || |||||||| ||| | | ||||| || |||||| Sbjct 82965 AAAATTCAAGATAAAGAAGGTATCCCGCCTGATCAGCAACGTTTAATTTTCGCCGGAAAA 83024 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | || ||| || |||| | || || || || ||||||||||| || | ||| Sbjct 83025 CAACTCGAAGATGGTAGAACTCTTTCGGACTACAACATCCAAAAAGAATCTACCCTTCAT 83084 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| | ||||| |||| ||||| ||| || Sbjct 83085 TTGGTCCTCCGTTTGAGAGGAGGTATGCAAATTT 83118 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || |||| |||||||| || || |||| | || | | Sbjct 83793 ATGCAGATTTTCGTTAAAACTTTAACCGGCAAAACCATCACCTTAGAAGTCGAGCCTAGC 83852 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || |||| |||||||| || ||||||||||| || |||||||| Sbjct 83853 GACACCATCGAAAACGTAAAGGCCAAAATTCAGGACAAAGAAGGTATCCCGCCTGATCAG 83912 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || ||||||||| | || ||| || |||| | || || || Sbjct 83913 CAACGTTTAATTTTCGCCGGAAAACAACTCGAAGATGGTAGAACTCTTTCGGACTACAAC 83972 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||||||||| || | |||||||| | ||||| |||| ||||| ||| || Sbjct 83973 ATCCAAAAAGAATCCACCCTTCATTTGGTCCTTCGTTTGAGAGGAGGTATGCAAATTT 84030 >seq2123 Length=17224 Score = 141 bits (156), Expect = 1e-28 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 ||||| || || || ||||| | ||||| ||| |||||||||||||| | Sbjct 11168 CCAACGTAGCCGTTGGGATCTCTACCATCCATACTATATTTATCATTTAGGTAAATAGAG 11109 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 ||||| |||||||| ||| ||||||||||||||||| || |||||||||||| Sbjct 11108 ATTTCCAATGCCTCTTCTGGACTTTTGGTCCATTCTAATATTTTCTTTGCCCAATACATT 11049 Query 202988 CTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAA 203047 |||||| |||| |||||||| || | || | ||||||||| || | ||||||||||||| Sbjct 11048 CTTAAAAATCCGTGCATTTTGCCTTCTATCACCATTTGTTTCTGAGCTGCATTCCATAAA 10989 Query 203048 TTGTCATGAGT 203058 ||||| || Sbjct 10988 AGATCATGGGT 10978 >seq19760 Length=34946 Score = 138 bits (152), Expect = 2e-27 Identities = 106/126 (84%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 |||||| || |||||||||||| | || |||||||| ||||||||| |||| ||| | || Sbjct 26105 AGGTATTCCCCCTGATCAACAACGTCTGATTTTTGCCGGAAAACAACTAGAAGATGGGCG 26164 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 ||| | |||||| ||||||||||||||||||||||||||||| || ||||| ||| | Sbjct 26165 AACTCTTTCAGATTACAATATTCAAAAAGAATCAACTTTGCATTTAGTATTACGATTAAG 26224 Query 124760 AGGTGG 124765 |||||| Sbjct 26225 AGGTGG 26230 >seq11882 Length=45137 Score = 122 bits (134), Expect = 1e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || |||| || || || || ||||| || || | || | ||| | Sbjct 7109 ATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACAATCACCCTCGAAGTCGAACCTTCA 7168 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||| | ||| ||| ||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 7169 GATTCGATTGAAAATGTAAAACAGAAAATTCAAGATAAAGAAGGTATTCCACCGGATCAA 7228 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || |||||||| || || ||| | | || ||| || || ||| Sbjct 7229 CAACGTTTGATCTTCGCCGGAAAACAGTTGGAAGATGGAAGGACCTTATCGGACTACAAT 7288 Query 124719 ATTCAAAAAG 124728 |||||||||| Sbjct 7289 ATTCAAAAAG 7298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755146990166400