Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq6025 104 4e-17 seq2123 102 2e-16 >seq6025 Length=34027 Score = 104 bits (114), Expect = 4e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 135727 GGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTC 135786 ||| |||| ||||||||||| || ||| ||| |||| ||||||| ||| ||||| | Sbjct 19412 GGTTTATGTGATAATTTACTAACAGCTACGGTACGAGCTTGGGATATAAATAAACCTTTA 19471 Query 135787 ATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAACATATA 135846 | || ||||| |||||||||||| |||||||| |||||||| || | | ||| || Sbjct 19472 TTATTTTGTCCAGCAATGAATACTAGAATGTGGGATCATCCTATAACTGCATCACAAGTA 19531 Query 135847 GATACGTTAAAATATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTAGCATGT 135906 | | |||| | ||| | || ||||| ||| || | ||||| | || ||| Sbjct 19532 GCACAACTGAAATCTTGGGGCTATATTGAAATTCCATGTATCGCAAAAACATTAATGTGT 19591 Query 135907 GGAGACGTAGGAAATGGTGCTATGGCAGAA 135936 ||||||||||| || || ||||| ||| Sbjct 19592 AAAGACGTAGGAATGGGCGCGATGGCTGAA 19621 >seq2123 Length=17224 Score = 102 bits (112), Expect = 2e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 189437 ACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCAT 189496 || ||||||| | ||||||| || | || | || ||||||| |||||| |||||||| Sbjct 10978 ACCCATGATCTTTTATGGAATGCAGCTCAGAAACAAATGGTGATAGAAGGCAAAATGCAC 11037 Query 189497 AGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGAC 189556 | |||||| ||||||||||||| ||||| ||| | |||||||| | || || ||||| Sbjct 11038 GGATTTTTAAGAATGTATTGGGCAAAGAAAATATTAGAATGGACCAAAAGTCCAGAAGAG 11097 Query 189557 GCTTTG 189562 || ||| Sbjct 11098 GCATTG 11103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922819177888920