Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq23131 89.7 3e-13 seq20950 89.7 3e-13 >seq23131 Length=98978 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| |||||||| |||||| || ||||| |||||||| || | |||| Sbjct 83320 AGAACCAAATGTAAAGTCGATTCTTTTTGAATGTTATAGTCGGAAAGAGTTCTACCGTCT 83261 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||| || ||||||||||| || ||||||||| || | || || || || Sbjct 83260 TCGAGTTGCTTACCGGCGAAAATGAGACGTTGCTGGTCGGGAGGAATGCCTTCTTTATCT 83201 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 || || ||||| || | || | |||| | | || || || | ||||||||| Sbjct 83200 TGGATTTTAGCCTTTACATTTTCAATAGTATCGCTAGGCTCAACTTCGAGAGTGATGGTT 83141 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| | ||||| || || || ||||| Sbjct 83140 TTGCCGGTCAAGGTTTTGACGAAAATTTGCAT 83109 >seq20950 Length=58994 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || | |||| ||| |||||||| || ||||| ||| | Sbjct 36965 CCACCGCGTAGACGAAGTACTAAATGTAGGGTAGACTCTTTCTGAATATTGTAATCGCTC 36906 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| |||| |||| ||| || || ||||| || | || ||||| || || Sbjct 36905 AAAGTTCGGCCGTCTTCCAGCTGTTTTCCAGCGAAGATCAATCGTTGCTGATCAGGAGGA 36846 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || || ||||| || ||| |||||| | | |||| ||||| || ||||| Sbjct 36845 ATGCCTTCTTTGTCCTGAAT-TTTGGCTTTAACGTTTTCGATCGTATCGGACGGCTCGAC 36787 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| ||||| || || | ||||||||||||||||||||| Sbjct 36786 TTCCAAGGTGATAGTTTTACCAGTTAAAGTTTTCACAAAGATCTGCAT 36739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322943155150880