Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq16112 194 1e-44 >seq16112 Length=40353 Score = 194 bits (214), Expect = 1e-44 Identities = 248/342 (73%), Gaps = 0/342 (0%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||| | ||||| | ||||||||||||||||||||||||||||| ||||| || Sbjct 33765 GGTGATCTCGGTCCGATTTATGGATTTCAATGGAGACATTTTGGAGCCGAATACAAAGAT 33706 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| | || | || |||| |||||||||||| ||||| |||| || ||| Sbjct 33705 ATGCATACCGACTACACGAATAAAGGCGTAGATCAATTAAAAAATATTATAGATACCATT 33646 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 |||| |||||| |||| |||||||| || |||| || ||||| || ||| |||| Sbjct 33645 AAAAATAACCCAGACGATAGAAGAATAATCCTATGTGCGTGGAATCCTCTTGATTTGCCC 33586 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457 ||||| || ||||| |||||| ||| || || || | | ||| ||| | Sbjct 33585 AAGATGGCATTACCTCCTTGTCATTGTCTAGTGCAGTTCTATGCGGTGAATGGAGAACTA 33526 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || || | |||||||||||| || || || ||||| | ||||| ||||| |||||||| Sbjct 33525 TCATGCCTAATGTATCAACGTTCAGCCGACATGGGTTTAGGTGTACCTTTTAATATTGCC 33466 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGAT 20559 ||||| || |||| || | |||||| |||||||||||| || Sbjct 33465 AGTTACGCCTTGCTCACTTGTATGATCGCACATGTTACAAAT 33424 Score = 109 bits (120), Expect = 4e-19 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20039 ATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTAT 20098 || |||| || ||||| || |||||||| |||| ||||||||| ||||||||||| ||| Sbjct 34005 ATCAATTCCCATTATTGACCACGAAACGAGTATATTGGAAAGGTGTTGTTGAAGAATTAC 33946 Query 20099 TATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTT 20158 | ||||| |||| |||||| |||||| ||| || | ||| ||||| ||||| |||| Sbjct 33945 TCTGGTTCATTAGAGGATCTACAAATGCTAAAGAATTATCAGACAAAGGGGTTAAAATTT 33886 Query 20159 GGA 20161 ||| Sbjct 33885 GGA 33883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399024800805235