Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq16112 95.1 2e-14 >seq16112 Length=40353 Score = 95.1 bits (104), Expect = 2e-14 Identities = 206/306 (67%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 || ||||| || || | || ||||| || ||||| || | || || | || ||| Sbjct 33765 GGTGATCTCGGTCCGATTTATGGATTTCAATGGAGACATTTTGGAGCCGAATACAAAGAT 33706 Query 70127 -TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCT 70185 ||| | || ||||| || | | || || |||||||| | | || || || || | Sbjct 33705 ATGC-ATACCGACTACACGAATAAAGGCGTAGATCAATTAAAAAATATTATAGATACCAT 33647 Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCA 70245 || | || ||| ||||| || || | | || | ||||||||| ||||||| Sbjct 33646 TAAAAATAACCCAGACGATAGAAGAATAATCCTATGTGCGTGGAATCCTCTTGATTTGCC 33587 Query 70246 CCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATT 70305 | | |||||| |||| || ||||| ||| | | ||||| || || |||| || | Sbjct 33586 CAAGATGGCATTACCTCCTTGTCATTGTCTAGTGCAGTTCTATGCGGTGAATGGAGAACT 33527 Query 70306 GTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGC 70365 |||||| |||||||||| | ||||||||||| | |||||||| ||||| ||||| Sbjct 33526 ATCATGCCTAATGTATCAACGTTCAGCCGACATGGGTTTAGGTGTACCTTTTAATATTGC 33467 Query 70366 AAGCTA 70371 || || Sbjct 33466 CAGTTA 33461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740756078997480