Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq23131 163 2e-35 seq20950 152 4e-32 seq11882 113 3e-20 seq1544 95.1 9e-15 >seq23131 Length=98978 Score = 163 bits (180), Expect = 2e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | ||||||||| | ||||| |||||||| ||||| || || Sbjct 82195 CCTCCTCTCAAACGGAGAACTAAATGCAACGTGGATTCTTTTTGGATGTTATAGTCCGAA 82136 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| ||||||| | |||||| || ||| | ||||||||||| ||||| ||| Sbjct 82135 AGAGTTCTGCCGTCTTCGAGTTGTTTTCCGGCGAAGATCAAACGTTGCTGGTCTGGAGGA 82076 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| || || |||||| ||| || ||| |||| |||||||||||| || || Sbjct 82075 ATACCTTCCTTATCTTGAATTTTAGCT-TTCACATTTTCAATGGTATCGCTAGGCTCGAC 82017 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||| || |||||||| |||| || ||||| || ||||||||| Sbjct 82016 TTCTAAGGTGATAGTTTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 81968 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | || |||||||||||||| |||||||| |||||||| || Sbjct 84019 CCTCCTCTCAAACGAAGGACCAAATGAAGGGTGGATTCTTTTTGGATGTTGTAGTCCGAA 83960 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | ||||| | |||||| || ||| | || |||||||| || || || Sbjct 83959 AGAGTTCTACCATCTTCGAGTTGTTTTCCGGCGAAAATTAAACGTTGCTGATCAGGCGGG 83900 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||||| |||||| |||| ||||| |||||| || || Sbjct 83899 ATACCTTCTTTGTCCTGAATTTTGGCCTTTACGTTTTCGATGGTGTCGCTAGGCTCGACT 83840 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||| |||||||| || || | |||||| || ||||| |||||| Sbjct 83839 TCTAAGGTGATGGTTTTGCCGGTTAAAGTTTTAACGAAAATCTGCATA 83792 Score = 150 bits (166), Expect = 1e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| || | | ||| ||||| | ||||| |||||||| ||||| || || Sbjct 82879 CCTCCTCTTAAACGGAGAACCAAATGCAACGTGGATTCTTTTTGGATGTTATAGTCCGAA 82820 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| ||||||| | |||||| || ||| | ||||||||||| |||||| ||| Sbjct 82819 AGAGTTCTGCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGA 82760 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || |||||| ||| ||| |||| ||||| |||||| || || Sbjct 82759 ATACCTTCTTTATCTTGAATTTTAGCCTTGACATTTTCGATGGTGTCGCTAGGCTCGACT 82700 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || || || || |||| |||||| || ||||| |||||| Sbjct 82699 TCTAATGTGATTGTCTTTCCAGTCAAAGTTTTAACGAAAATCTGCATA 82652 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| || | | ||| ||||| | ||||| |||||||| ||||| || || Sbjct 82651 CCTCCTCTTAAACGGAGAACCAAATGCAACGTGGATTCTTTTTGGATGTTATAGTCCGAA 82592 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| ||||||| | |||||| || ||| | ||||||||||| |||||| ||| Sbjct 82591 AGAGTTCTGCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGA 82532 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || |||||||| || |||||| ||| || ||| |||| || || |||||| || || Sbjct 82531 ATACCTTCTTTATCTTGAATTTTAGCT-TTCACATTTTCAATTGTGTCGCTAGGCTCAAC 82473 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||| |||||||| || |||| ||||| || |||||||||||| Sbjct 82472 TTCAAGGGTGATGGTTTTGCCGGTCAAGGTTTTGACGAAAATTTGCATA 82424 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | || ||||||||| | || || |||||||| || || ||||| | Sbjct 83791 CCGCCTCTCAAACGTAGAACTAAATGTAAAGTTGACTCTTTTTGAATATTATAATCTGAT 83732 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||| | ||||| || ||| | ||||||||||| || ||| || Sbjct 83731 AAGGTTCTACCATCTTCAAGCTGTTTTCCGGCGAAGATCAAACGTTGCTGATCGGGAGGG 83672 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || ||||||| || ||| |||| || || |||||| ||| || Sbjct 83671 ATACCTTCTTTATCTTGAATTTTGGCTTTCACATTTTCGATCGTGTCGCTAGGTTCAACT 83612 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||||||||| || || | |||||| ||||||||||||||| Sbjct 83611 TCAAGCGTAATGGTTTTTCCGGTTAAAGTTTTAACAAAAATTTGCATA 83564 Score = 141 bits (156), Expect = 7e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | ||||||||| | ||| || |||||||| |||||||| || Sbjct 81967 CCTCCTCTCAAACGGAGAACTAAATGCAAGGTTGATTCTTTTTGGATGTTGTAGTCCGAA 81908 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| ||||||| | |||||| || ||| | || | |||||| || ||| ||| Sbjct 81907 AGAGTTCTGCCGTCTTCGAGTTGTTTTCCGGCGAAGATGAGACGTTGCTGATCGGGAGGA 81848 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || |||||||| || ||| || ||| || || |||| ||||| || ||| || || Sbjct 81847 ATACCTTCTTTATCTTGAATCTTAGCT-TTGACGTTTTCAATGGTGTCACTAGGCTCGAC 81789 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || | ||| ||||||||||| |||| ||||| ||||| || ||||| ||| Sbjct 81788 TTCGAGGGTGATGGTTTTACCAGTCAACGTTTTCACAAAGATCTGCATTTTT 81737 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | || ||||||||||| || |||||||| |||||||| || Sbjct 83107 CCTCCTCTCAAACGGAGGACCAAATGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAA 83048 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | ||||| | |||||| || ||| | || |||||||| || || || Sbjct 83047 AGAGTTCTACCATCTTCGAGTTGTTTTCCGGCGAAAATTAAACGTTGCTGATCAGGCGGG 82988 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || |||||| ||| ||| |||| ||||| |||||| || || Sbjct 82987 ATACCTTCTTTATCTTGAATTTTAGCCTTGACATTTTCGATGGTGTCGCTAGGCTCGACT 82928 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || || || || |||| |||||| || ||||| |||||| Sbjct 82927 TCTAATGTGATTGTCTTTCCAGTCAAAGTTTTAACGAAAATCTGCATA 82880 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | ||| ||||| | || || |||||||| ||||| || ||| Sbjct 83335 CCTCCTCTCAAACGGAGAACCAAATGTAAAGTCGATTCTTTTTGAATGTTATAGTCGGAA 83276 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| ||||||| | ||| || || ||| | || | |||||| |||||| ||| Sbjct 83275 AGAGTTCTACCGTCTTCGAGTTGCTTACCGGCGAAAATGAGACGTTGCTGGTCGGGAGGA 83216 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || ||||| ||||||| |||| || ||||||||| || || Sbjct 83215 ATGCCTTCTTTATCTTGGATTTTAGCCTTTACATTTTCAATAGTATCGCTAGGCTCAACT 83156 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | || |||||||| || |||| ||||| || |||||||||||| Sbjct 83155 TCGAGAGTGATGGTTTTGCCGGTCAAGGTTTTGACGAAAATTTGCATA 83108 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | | || |||||| || || | || || ||||| || ||||||||||| Sbjct 84247 CCACCACGAAGTCGTAAAACCAAGTGCAATGTAGATTCTTTCTGAATGTTGTAATCAGAA 84188 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| ||| | ||||| ||||| ||||| ||| | || | |||||| || || ||| Sbjct 84187 AGAGTTCGACCATCTTCCAATTGCTTGCCGGCGAAAATGAGACGTTGCTGATCAGGAGGA 84128 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||| ||||| |||||| ||| || |||| || || || ||| || || Sbjct 84127 ATTCCTTCCTTGTCTTGAATTTTAGCCTTGACGTTTTCGATAGTGTCACTAGGCTCGACT 84068 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | || |||||||| || || | ||||| || |||||||||||| Sbjct 84067 TCGAGAGTGATGGTTTTGCCAGTTAAGGTTTTGACGAAAATTTGCATA 84020 >seq20950 Length=58994 Score = 152 bits (168), Expect = 4e-32 Identities = 162/211 (77%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 ||||||||||| || || ||||| || || || |||||||| | | ||| |||||||| Sbjct 37175 ACTAAATGAAGAGTAGATTCTTTCTGAATATTATAATCGCTCAAAGTTCGGCCGTCTTCT 37116 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| || ||| | || || ||||| ||||| ||| |||||||||||||| | Sbjct 37115 AATTGTTTTCCGGCGAAAATTAATCGTTGCTGGTCAGGTGGGATTCCTTCTTTGTCCTGA 37056 Query 15275 ATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||| || || | || || || ||| ||||| || || ||||| ||||| Sbjct 37055 ATTTTAGCT-TTCACGTTCTCGATAGTGTCGGATGGCTCTACTTCCAAAGTAATAGTTTT 36997 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| |||| ||||||||||||||||||||| Sbjct 36996 ACCAGTCAACGTTTTTACAAAAATTTGCATA 36966 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | |||| ||| ||||||||||| ||||| || ||||| || || ||||| || Sbjct 38333 CCACCGCGTAATCGTAATACTAAATGAAGAGTGGATTCCTTTTGAATATTATAATCACTC 38274 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | ||| | ||||| |||||||| |||||| | || || |||||||| || ||| Sbjct 38273 AATGTTCGGCCATCTTCCAATTGTTTACCAGCGAAGATTAATCGTTGTTGATCAGGCGGA 38214 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || || |||||||| ||||| ||| ||||| |||| || ||||| ||| || Sbjct 38213 ATACCCTCTTTGTCTTGTATTTTAGCT-TTTACGTTTTCAATCGTATCAGATGGTTCGAC 38155 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||||| |||||||| || ||||||||||| |||||||||||| Sbjct 38154 TTCTAGAGTAATAGTTTTACCGGTTAGAGTTTTTACGAAAATTTGCATA 38106 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 |||||| | ||||| | ||| |||||||| || ||||| || || ||||| ||||| Sbjct 38562 GCCACCGCGTAATCTAAGAACCAAATGAAGAGTACTCTCTTTCTGAATATTGTAGTCGCT 38503 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | | ||||| |||||||| || ||| | || | |||||| |||||| ||| Sbjct 38502 TAAAGTACGACCATCTTCCAATTGTTTACCGGCGAAGATTAGACGTTGCTGGTCGGGTGG 38443 Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||||||||| ||| ||| || ||| |||| |||||||| ||| || Sbjct 38442 GATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTTTCGATGGTATCAGATGGTTCGAC 38383 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| ||||| |||||||| |||| ||||| || ||||||||||| Sbjct 38382 TTCTAATGTAATTGTTTTACCAGTCAACGTTTTCACGAAAATTTGCAT 38335 Score = 141 bits (156), Expect = 7e-29 Identities = 163/218 (75%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 |||||||| ||||| || ||||| || || ||||||||||| | | ||| ||||||| Sbjct 36947 ACTAAATGTAGGGTAGACTCTTTCTGAATATTGTAATCGCTCAAAGTTCGGCCGTCTTCC 36888 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| |||||| | ||||| ||||| || || ||||| ||||||||||| | Sbjct 36887 AGCTGTTTTCCAGCGAAGATCAATCGTTGCTGATCAGGAGGAATGCCTTCTTTGTCCTGA 36828 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 |||||| || || |||| || |||||| || || || ||||| || |||||| Sbjct 36827 ATTTTGGCTTTAACGTTTTCGATCGTATCGGACGGCTCGACTTCCAAGGTGATAGTTTTA 36768 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAA 15372 || || | |||||| ||||| || ||||| |||||||| Sbjct 36767 CCAGTTAAAGTTTTCACAAAGATCTGCAT-TTTGAAAA 36731 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 ||||||||||| || || ||||| || || || |||||||| | | ||| |||||||| Sbjct 37403 ACTAAATGAAGAGTAGATTCTTTCTGAATATTATAATCGCTCAAAGTTCGACCGTCTTCT 37344 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| || ||| | || || ||||| ||||| ||| |||||||||||||| | Sbjct 37343 AATTGTTTTCCGGCGAAAATTAATCGTTGCTGGTCAGGTGGGATTCCTTCTTTGTCCTGA 37284 Query 15275 ATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||| || || |||| || || ||| ||| || || | ||||| || || Sbjct 37283 ATTTTAGCT-TTAACGTTTTCAATCGTGTCGGACGGTTCGACTTCCAGAGTAATAGTCTT 37225 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || | ||||| || |||||||||||| Sbjct 37224 ACCAGTTAATGTTTTCACGAAAATTTGCATA 37194 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || |||||||| || || ||||| || || || |||||||||| | ||| ||||||| Sbjct 37631 ACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCGCTTAAAGTTCGGCCGTCTTCC 37572 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| |||||| | || || ||||| ||||| ||| |||||||||||||| | Sbjct 37571 AATTGTTTTCCAGCGAAAATTAATCGTTGCTGGTCAGGTGGGATTCCTTCTTTGTCCTGA 37512 Query 15275 ATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||| || || |||| || || ||| ||| || || | ||||| || || Sbjct 37511 ATTTTAGCT-TTAACGTTTTCAATCGTGTCGGACGGTTCGACTTCCAGAGTAATAGTCTT 37453 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || | ||||| || |||||||||||| Sbjct 37452 ACCAGTTAATGTTTTCACGAAAATTTGCATA 37422 Score = 134 bits (148), Expect = 1e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 |||||| || || |||||||| ||||| ||||| |||| | ||| | ||||||||||| Sbjct 38082 ATGAAGAGTAGATTCTTTTTGAATGTTATAATCACTTAAAGTTCGGCCATCTTCTAATTG 38023 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 |||||| || | || || ||||| |||||| ||| || |||||||| || ||||| Sbjct 38022 TTTGCCGGCAAAAATTAATCGTTGCTGGTCGGGTGGGATACCTTCTTTATCTTGGATTTT 37963 Query 15280 -GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338 ||| || || | || || || ||| ||||| || || ||||| |||||||| | Sbjct 37962 AGCT-TTCACGTTCTCGATAGTGTCGGATGGCTCTACTTCCAAAGTAATAGTTTTACCAG 37904 Query 15339 TCAGAGTTTTTACAAAAATTTGCATA 15364 | | ||||||||||||||||||||| Sbjct 37903 TTAACGTTTTTACAAAAATTTGCATA 37878 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 |||||||||||||| || ||||| || || |||||||| || | |||| | ||||| Sbjct 37859 ACTAAATGAAGGGTAGACTCTTTCTGAATATTGTAATCACTCAATGTTCTACCATCTTCC 37800 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || |||||||| ||| | || || | ||| || || |||||| |||||||| || Sbjct 37799 AACTGTTTGCCGGCGAAAATTAATCTTTGCTGATCAGGTGGAATGCCTTCTTTATCTTGG 37740 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 ||||| ||| ||| |||| || || ||| ||| || || | ||||| |||||| Sbjct 37739 ATTTTAGCCTTAACATTTTCAATCGTGTCGGACGGTTCAACTTCCAGAGTAATAGTTTTA 37680 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||||||| || || ||||||||| Sbjct 37679 CCAGTTAGAGTTTTAACGAATATTTGCATA 37650 >seq11882 Length=45137 Score = 113 bits (124), Expect = 3e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 15174 CTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15233 ||||||| || ||||| || || | || | ||||| || ||||| || ||| | | Sbjct 7298 CTTTTTGAATATTGTAGTCCGATAAGGTCCTTCCATCTTCCAACTGTTTTCCGGCGAAGA 7239 Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293 ||||||||||||| || |||||| |||||||| || |||||| |||||| ||| Sbjct 7238 TCAAACGTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTCTGTTTTACATTTT 7179 Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353 | || | ||| | ||| || || | ||| || |||||||| || || |||||||| | Sbjct 7178 CAATCGAATCTGAAGGTTCGACTTCGAGGGTGATTGTTTTACCCGTGAGGGTTTTTACGA 7119 Query 15354 AAATTTGCAT 15363 |||||||||| Sbjct 7118 AAATTTGCAT 7109 >seq1544 Length=27568 Score = 95.1 bits (104), Expect = 9e-15 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 15260 CCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCT 15319 ||||||||||| ||||||| |||||| |||| || ||||||||| ||| || || Sbjct 14464 CCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCGATTGTATCGCTAGGTTCGACCTCA 14405 Query 15320 AAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369 | ||| ||||| ||||| |||| ||| || || ||||||||||| ||||| Sbjct 14404 AGGGTGATGGTCTTACCCGTCAAAGTCTTGACGAAAATTTGCATGTTTGA 14355 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || |||||||| | || || ||||| || || |||||||| Sbjct 14668 CCACCTCTCAATCTCAACACTAAATGCAAAGTTGATTCTTTCTGGATATTGTAATCAGAA 14609 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| | |||||| || ||| | |||||||||||||||||| ||| Sbjct 14608 AGGGTACGTCCATCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTTGGTCGGGAGGA 14549 Query 15257 ATTCCT 15262 || ||| Sbjct 14548 ATGCCT 14543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362034758747343