Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq16312 129 7e-25 seq16112 123 3e-23 >seq16312 Length=15809 Score = 129 bits (142), Expect = 7e-25 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 164490 AATaaaaaaaTTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTG 164549 ||||||| ||||| |||||||| | || || ||| ||||| ||||||||||||| Sbjct 7692 AATAAAATTCTTAGGATGTAAACACGTCAAGGGTATTCTATTATATGGACCTCCTGGAAC 7751 Query 164550 CGGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAA--TCGCGACCCGTTAAA 164607 ||||||||||| |||||||| |||| | || || || ||| || || ||| Sbjct 7752 TGGTAAAACATTGATGGCTCGTCAAATTGGTAAAATGTTGAATGCTCGAGAGCCA--AAA 7809 Query 164608 ATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGA 164667 ||||| ||||||||| || | ||| | |||||||| || || |||||||| ||| || | Sbjct 7810 ATTGTGAATGGTCCTCAAATTTTGGATAAATATGTTGGAGAATCAGAAGCAAATATTCGT 7869 Query 164668 AAGTTGTTTCAGGAGGCTGAAGAAGAACAAAA 164699 |||||| || |||||||||||| |||| Sbjct 7870 CGATTGTTTGCAGATGCTGAAGAAGAAGAAAA 7901 >seq16112 Length=40353 Score = 123 bits (136), Expect = 3e-23 Identities = 219/306 (72%), Gaps = 20/306 (7%) Strand=Plus/Plus Query 6936 ATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATT-GACAAGATAAAA 6994 |||||||||||||||||| ||||| || ||||| | |||||| |||| | || |||| Sbjct 33472 ATTAAAAGGTACACCTAAACCCATGTCGGCTGAACGTTGATA-CATTAGGCATGATAG-- 33528 Query 6995 TATTGTCTATA----GCATAAAATTGACACAATACA-TGACATGGAGGTAAAAC-AGCCT 7048 || || || ||||| || || ||| | ||| ||||| |||||||| | | | | Sbjct 33529 --TTCTCCATTCACCGCATAGAACTG-CACTAGACAATGACAAGGAGGTAATGCCATCTT 33585 Query 7049 GATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTT 7108 | | | |||| |||||||| ||| | | || | |||||| | ||| || ||| Sbjct 33586 GGGCAA-ATCAAGAGGATTCCACGCACATAGGATTATTCTTCTATCGTCTGGGTTA-TTT 33643 Query 7109 TTAATTTTGT-TATAATTATTTGTAATTGATCTATACCCTGACCTTCAT--AATTAGTAT 7165 ||||| | | |||||| ||| ||||||||||| || | | ||| | | | |||| Sbjct 33644 TTAATGGTATCTATAATATTTTTTAATTGATCTACGCCTTTA--TTCGTGTAGTCGGTAT 33701 Query 7166 GACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAAT 7225 | || | | || | ||||||||||||||||||||||| |||||||| ||||| | || Sbjct 33702 GCATATCTTTGTATTCGGCTCCAAAATGTCTCCATTGAAATCCATAAATCGGACCGAGAT 33761 Query 7226 CACCTT 7231 |||||| Sbjct 33762 CACCTT 33767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595628266006800