Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq31824 109 6e-19 >seq31824 Length=40797 Score = 109 bits (120), Expect = 6e-19 Identities = 162/226 (72%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| || || |||||||| || || || || ||||| | |||||||| | Sbjct 10844 CTTCATCTCTTGAAATCAATTCATTGCTGAAAGTCAACCCAGGCATAAGGCCTCTCTTCT 10903 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 ||| ||||||||| | ||||| ||| ||||||||||| || || ||||| ||||||| Sbjct 10904 TTAGCCAAAATATCGCTGCAAAACTTCCAGAAAAGAAAATTCCTTCGACGGCTGCAAATG 10963 Query 21618 CAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677 | | | || ||| || |||||| | || ||| ||||||||| ||||| | || Sbjct 10964 CGATAATTCTTTCCCCAAATGTAGCATTTTGATCGGCTATCCATTTCAACGCCCAGTCTG 11023 Query 21678 CCTTTTCT-TTAATACAATCAATTGTATCAATAGCTTTTAA-AAGA 21721 |||| || || | |||| || || |||||||| || || |||| Sbjct 11024 -CTTTCCTCTTCACACAAGGCATAGTTTCAATAGCATTGAATAAGA 11068 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 21767 CTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCC 21826 ||||||||||| ||||||| ||| ||||| | || ||||||||||||||| |||| || Sbjct 11189 CTATACATTTCCGAATGTACATTCTCTATGGTGATTTGAAATCCGTAAAAAAATCTGGCT 11248 Query 21827 TCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAG-TTTTCATTTACTATTCCATC 21885 || | | || || || | | || |||| | |||| ||||| || || || || || Sbjct 11249 TCAGGAATCTGGACTTCTTGAAAGAAACGTT-CGACAAGATTTTCGTTCACGATACCGTC 11307 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGT-TATCTGTTAATT 21944 | || || ||||||||||| | | | || || | || ||| | | || ||| || Sbjct 11308 AGAAGCAGCGAAAAATGCCAACACGTGTGAAATGAATTTTCTTTCCTCTGGCT-TTAGTT 11366 Query 21945 TTTTCCAATCTAATAAATC 21963 ||| ||||||| ||||| Sbjct 11367 TTTCCCAATCTCTGAAATC 11385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531683232626520